Actinidia eriantha (wild kiwifruit): 130754987
Help
Entry
130754987 CDS
T09464
Name
(RefSeq) pre-mRNA-processing factor 39-2 isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130754987
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130754987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
GIP1_N
Motif
Other DBs
NCBI-GeneID:
130754987
NCBI-ProteinID:
XP_057465266
LinkDB
All DBs
Position
19:14099774..14147328
Genome browser
AA seq
1299 aa
AA seq
DB search
MLEDCNMDSNETVNCLISQGYNLLALSGGFDEQLQELIRRGSLDFDTWTSIISNIERTFP
ENIERICSVYDSFLSEFPLCHGYWRNYAAHKAHLCTLDKVVEIFERAVQSATYCVSVWVE
YCSFGMLAYKDPSDVRRLFKRALSFVGKDFLCHPLWDKYIEFEFSQQQWSFLAQICVQTL
KFPTKRLHRYYDNFKKFVTILEEEMKLHDNCSIEIESESVSDAAVPMHKDEVSGIINSLV
DPSTGSFNYKALQKYISIGESFYQEACEVETKIHCFENNIQRPYFHVLPLDDNQLENWHR
YLNFIERQEDFDWAVKLYERCLIPCAIYPEFWMRYVEFMETKGGREIANFALDRATKIFL
KNVPAIHVFNSRFKEQIGDRYGARAAYLWSDDESSSHFIEKVINEANMEKRLGNFAAASS
VYEKALAVAAERQKLHSVPILYIHFSRLKYMMAGSIDAARDVIIDGIQRVPHCKLLLEGL
IHFLMMHGGPGQLNVVDNIIADAISSGSEASQGLGAKDREDISILYLEFVDQCGTVHDIR
KAWNRHIKLFPHLIRTTSSNKLPTSGIQLLDMMGGRRKNPFPLFSRPSGGHNPNQLIQLQ
MPQQGLSLPDNDAIQPDQVCEDQFQPEDKDNSAQDQPQQLSLKTGEQSVEDAFGVNKSTH
DSIIQSEDDASGQMESTPYVVHQSREDASEPVESTHDLLHESGEDACEPIESTPYLVHQS
REDASEPVESTHDLLHESGEDACGPIESTPCLVQPPGEDACEPMELTHEVVHQPREDALG
PIEPSNDLVHQVADDEAFPNASQEYSDPTNVEQDQDQDQNQDQEPEPEQHLKPLPLDGLP
LNSQDKEYGDSTPMSSYENRSPTTNRVQDNCQTANESPSIVGPGSTRSPDSAQIQNESPD
SAQKQNESVNPSSAANHQNPPPVQAQPETQEPTDGASSWHHIDNTVQASGNARSVFPGNL
QDKQNQRRQVTPQQQRPQAEMGARTLTSQGYSHHPLPGQNPQVQQGIQTQNQDQVGPVRG
KSTVAHFWPTQNLQQQNLVSVHQPQPDSVPASHSSAQMPQFPMQSGGQFGNAGYNQAYNQ
MMENYFRQQQMMAQQHYNQQQQFTQQLQQIQQPYQQKQHLLQPYQQYELYAQQQQQMAQF
YYQQLPQMQDQQAQMMWQQLQNAHQQQDQLYYQYMQQQQAYQQSQQQYQLQQQQGYEQLQ
QQQGYQQVLQQQPHHQQPQQKQQEELQMQQQSFYQQVMPPHSASASRNAQSPHPQQQSQG
IRPPHCAAASGSAVTPHQTSRGVSPQCASPSGPPSSPYN
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaagactgcaatatggactctaacgagaccgtgaactgccttatctctcaagga
tataatctgctggcactttctggcggttttgatgaacaacttcaggaattgattcgtaga
ggctcattagactttgatacttggacttcaattatttcaaacatcgagagaacatttcca
gaaaatatagagaggatctgttcagtgtatgactcttttttgtcagagtttcctttgtgt
catggatactggaggaattatgctgctcacaaggcacacttatgcactctggacaaggtt
gttgaaatctttgaacgagctgtacaatctgcaacatactgtgtcagtgtttgggttgaa
tattgtagcttcggtatgttggcatataaggatccatctgatgttcgcagattatttaaa
agagcactgtcctttgttggaaaggacttcttatgtcatcccctctgggacaagtacatt
gagtttgagttctctcagcagcagtggagcttccttgctcagatttgtgtccaaactttg
aagtttcctacgaaaagattacatcgttattatgacaactttaagaagtttgtgaccatt
ctggaagaagagatgaaactacatgacaactgcagtattgaaatagagtcagaatctgtt
tctgatgctgcagtcccaatgcataaagatgaagtctctggtatcattaacagtctggtg
gatccttccactggctcctttaactataaagctctacagaaatatatatctattggggag
agtttctaccaggaagcttgtgaggtggaaacaaaaatacattgctttgagaataatatc
cagcggccctattttcatgtattgccacttgatgacaatcaactagaaaattggcatcgc
tatctgaatttcattgagaggcaagaagattttgattgggctgtaaaactttatgaaaga
tgcttaataccctgcgctatttaccctgagttctggatgcgttatgtcgaatttatggaa
actaagggagggcgagagatagcaaattttgcactagaccgagcaacaaaaatatttctt
aagaatgtgccagcaatccatgttttcaattcccggtttaaggagcaaattggagataga
tatggtgcacgtgctgcatatctttggtctgatgacgaatccagttcccacttcattgaa
aaagttataaatgaagccaatatggaaaaacgattgggaaattttgcagcagcttccagt
gtatacgagaaagcacttgcagtggcagcagagaggcagaagctgcatagtgttccgatt
ctgtacattcatttttctcgtcttaaatatatgatggcaggcagcatagatgcagctaga
gatgttattatagatggcatacaacgtgtgccccattgcaaattacttctagagggattg
atacactttttgatgatgcatggaggaccaggacaactgaatgtagtggacaacatcata
gctgacgccatatcttcaggatcagaagcatctcaaggtttgggagctaaagatcgggag
gatatctcaattttatatttagagtttgttgaccaatgtggaactgtccatgatatacgt
aaggcatggaatcgccacataaaattgtttccacatttgatcaggactacctcctcaaat
aagctcccaacttctggtattcagttgttggacatgatggggggaagaagaaagaaccct
ttcccgttgttctctcgcccatcgggaggccacaatcccaaccaacttatacagctccaa
atgccacagcagggactatcattgcctgacaatgatgctatccaacctgatcaggtttgc
gaagatcagtttcaaccagaagacaaagacaacagtgcacaggatcaaccacaacagtta
tctttgaaaactggagagcagtctgtggaagatgcctttggagtaaataagtcaacccat
gattcgataattcagtctgaagatgatgcatctggacagatggaatcaactccttatgtg
gtacatcagtctagagaagatgcaagtgaaccagtggagtcaactcatgatttactacac
gaatctggagaagatgcatgtgaaccaatagagtcaactccttatttggtacatcagtct
agagaagatgcaagtgaaccagtggagtcaactcatgatttactacacgaatctggagaa
gatgcatgtggaccaatagagtcaactccatgtttagtacaaccacctggagaagatgca
tgcgagccaatggaattaactcacgaggtagtgcaccaacctagagaagatgcacttgga
ccgattgagccatctaacgatttagtacatcaagttgctgatgatgaagcatttccaaat
gcctcacaggaatactctgatcccaccaatgttgagcaagaccaagaccaagaccaaaac
caagaccaagagcctgagcctgaacagcatctgaagccacttcctttagatggtcttcct
ttaaattctcaggataaagaatatggggactcgacacctatgtcttcttatgagaatcga
tctcctaccactaatagagtacaagacaactgccagactgctaatgaaagcccttctata
gtcggccccggaagcactcgatctcctgattctgcacaaatccaaaatgaatctcctgat
tctgcacaaaagcaaaatgaatcagtgaatccttcgtctgcagcaaatcatcaaaatcct
ccaccagtacaagcacagccagagacgcaggagcctacggatggtgctagtagctggcat
cacattgacaacacagttcaagcctctggaaatgcaagatctgtgtttcctgggaatttg
caagacaaacagaatcaacgaaggcaagttactccgcagcaacaacgccctcaagctgaa
atgggtgcccggacacttactagtcaaggttattctcatcatcctttacctgggcaaaat
ccacaagttcagcaaggcatccagactcaaaatcaggaccaagtaggtcctgttcggggg
aagtcaacagttgctcatttctggccaacacaaaatttgcagcagcagaacttagtttct
gtacaccaaccgcaaccagattctgtgcctgcttctcactcttcagcacagatgcctcag
tttcctatgcaaagtggtgggcagtttgggaatgcaggttataatcaagcatacaatcag
atgatggaaaactatttccggcagcagcagatgatggctcaacaacactataaccagcaa
cagcaatttacgcagcagctccaacaaattcaacaaccctatcagcagaagcagcatctc
cttcagccatatcaacagtacgaactttatgcacagcagcaacaacagatggcgcagttt
tactatcaacagttgccacagatgcaggatcagcaagctcagatgatgtggcagcaacta
caaaatgctcatcagcagcaagatcagctatattaccagtatatgcaacagcaacaagca
tatcaacaatcacagcagcagtatcaactgcaacaacaacaagggtatgagcaactgcaa
caacaacaagggtatcagcaagtcctgcagcagcagccccaccaccagcagccccagcag
aagcaacaggaagaattacagatgcaacagcagagcttctatcaacaggttatgccacct
catagtgcaagtgcatctagaaatgctcaatctccacatccccagcaacaatctcaaggc
ataagaccaccgcattgtgcagctgcctctggatctgctgtaactccacatcaaacttcc
cgtggagtttcgccgcagtgtgcaagtccatctggaccaccctcatctccgtataactag
DBGET
integrated database retrieval system
