Actinidia eriantha (wild kiwifruit): 130755075
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Entry
130755075 CDS
T09464
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03015
mRNA surveillance pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130755075
09122 Translation
03013 Nucleocytoplasmic transport
130755075
03015 mRNA surveillance pathway
130755075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130755075
03041 Spliceosome [BR:
aew03041
]
130755075
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130755075
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130755075
Spliceosome [BR:
aew03041
]
Complex C
Other components
EJC/TREX
130755075
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130755075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
YihI
Motif
Other DBs
NCBI-GeneID:
130755075
NCBI-ProteinID:
XP_057465373
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All DBs
Position
19:24528956..24538100
Genome browser
AA seq
428 aa
AA seq
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MGEVRDNEAYEEELLDYEEEDEKAPDSVNGKASVEAPKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNVKVHKDLLKNECPHIVVGTPGRILA
LGRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVT
RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaagtgagagacaacgaggcctacgaggaagagcttctggactacgaggaggag
gacgaaaaagcccctgactccgtcaacggcaaagcctccgtcgaagcccccaaaaagggc
tatgttggaatccacagctcggggttcagagatttcctgttgaaaccagagcttctccgt
gcaattgtagattcaggatttgagcatccttcagaagtgcaacatgagtgtatacctcaa
gctatcttaggaatggatgtcatctgtcaagcaaagtcaggaatggggaaaactgcagtg
tttgttctctctactctgcagcagattgaacctgttgcaggacaagttgccgctcttgtc
ctctgtcatacaagggaattggcttaccagatctgccatgaatttgagaggttcagtacc
tatttgcctgatattaaggttgctgtcttctatggtggagtcaatgtcaaggttcacaag
gatttactgaagaatgagtgccctcatattgttgttggaactcctggtagaatattggct
cttggaagagataaggaccttggcttaaagaatgtgaggcattttatccttgatgagtgt
gacaagatgcttgaatcacttgacatgaggagagatgtgcaggaaatttttaagatgacc
cctcatgataaacaagttatgatgttctcagctacactcagcaaagagattcgccctgtt
tgcaagaagtttatgcaagatccaatggaaatttatgtggatgatgaggccaaattgact
cttcatggtcttgtccagcattacattaaattgagtgagcttgagaaaaaccgcaagctt
aatgacctccttgatgctctggacttcaatcaagttgtcatttttgtcaaaagtgtcacc
agagcagctgagctgaacaagttacttgtggagtgcaacttcccttctatctgcatccat
tctggaatgtctcaggaagaaaggttgacacgctacaaaggtttcaaggaggggcataaa
agaattcttgtggccactgatttagtcggaagaggaattgacattgagcgagtcaacatt
gttatcaactatgacatgcctgattctgctgacacctatctacaccgcgttggcagagct
ggtaggtttggtaccaaagggcttgcgataacatttgtctcttctgcatccgattctgat
gttctcaatcaggttcaggaaaggtttgaggtggatattaaggaacttcctgagcaaatt
gatacttctacatacatgccatcgtga
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