Actinidia eriantha (wild kiwifruit): 130755115
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Entry
130755115 CDS
T09464
Name
(RefSeq) regulator of nonsense transcripts UPF3-like isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130755115
03015 mRNA surveillance pathway
130755115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130755115
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
130755115
mRNA cycle factors
P-body specific factors
130755115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
130755115
NCBI-ProteinID:
XP_057465431
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All DBs
Position
19:complement(13354939..13370046)
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AA seq
522 aa
AA seq
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MKGPLDRTKVVVRHLPPTISQSALAEQIDGRFAGRYNSLVFLPGKNSQKRLSYARAYIDF
KRPEDVIEFAEYFDGHVFVNEKGTQFRTIVEYAPSQRIPKHWSKKDGREGTIFKDPDYME
FLEFLAKPVENLPSAEIQLERREAERAGAAKDAPIITPLMDFVRQKRAAKGGNRRSLSNG
KPTRKGHGATYGSPSSASSRRGSDRKRILTSMYVLRDTAKNTSGKDKSTYTAVPNRHDQQ
LSDKSLALAAASGTEISEEENGISGSTDAGKKKVLLLKGKEKEIPHVSGGMSLQQNANSV
KNSPGSSAPKQNQRREGSGRIMKSILLNKDARHNQSSVVHSDKHSRSSNLEKDRRPPRPQ
IQMSLKDSNGGPEYKVVGNDLHSFYSEKQEKHTRNKDRPDRGVWTPLHRSDGSHASDESL
SSSAFQSTQLQPDSVEESHGEVKMKMSNARSGETRTVRGGRSSYPPLDNGSHKHSGRRGL
VHNVKDDGSSIISDGKLLKRGGSSGYVPHEKQVWVQKSSAGS
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtccgttagatcgaactaaagtggtggttcggcacttgccgccgaccatttcg
cagtcggcgttggcggagcaaatcgacggccgcttcgctggtcgctacaattcgctcgtt
ttccttcccggcaagaacagccagaagcgtctatcatatgcaagagcatatattgacttc
aagaggccagaggatgtcattgagtttgctgagtactttgatgggcatgtttttgtcaac
gagaagggtactcaattcagaactattgttgagtatgctccttcacaacgcattccaaag
cactggtctaagaaagatggtcgtgaagggaccatatttaaagatccagattacatggag
ttccttgaatttcttgcaaagcctgttgagaatcttcccagtgcagagatacaattggag
agaagggaagcggaacgagctggtgctgcaaaggatgcccctataatcacacctttgatg
gattttgttcgtcagaaaagagccgccaagggtggaaatcggaggtctttgtctaacggg
aaaccaactagaaaaggtcatggagcaacgtatgggagtcctagttcggcttcatcaaga
cgaggttctgacagaaaaagaattttgactagcatgtatgttttgagagatactgcaaag
aatacaagtggcaaagacaaatcaacatacactgcagttcctaatcgacatgatcagcag
ctttctgacaaatcccttgctttagctgctgcatctggaactgaaatatcagaagaggaa
aatggaatttctggaagcactgatgctggaaagaagaaagttctgcttttgaaggggaaa
gagaaagaaattcctcatgtgtctggtggcatgtcattgcagcagaatgcaaattctgtc
aaaaattcacctggttcaagtgctcccaaacagaaccagcgacgcgaaggcagtggaagg
ataatgaaaagcatacttctcaacaaggatgcacgtcacaatcaatcatctgtggtccat
tctgataagcattcccggtcctcaaatctggaaaaggacagaagacctcctcgaccccaa
attcagatgtccttgaaggattcaaatggagggccagaatataaggtcgttggtaatgat
ttacatagtttttacagtgagaagcaggagaaacatacaaggaacaaggataggcctgat
cgtggtgtatggactcctcttcaccgttcagatggatctcatgctagtgacgagtcttta
tcatcttctgcttttcaatctacacagttacagccagattctgtggaagaaagtcacgga
gaagtcaaaatgaaaatgtcaaatgcaaggagtggtgaaaccagaacagttagaggtgga
cgtagcagttatcccccactagataatggttcccataaacacagtggtcgccgggggtta
gtacataatgtaaaggatgatggctcttctattataagtgacgggaaactcttgaagaga
ggaggttcttctggctatgttccccatgagaaacaagtatgggttcaaaaatcaagcgct
ggttcttag
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