Actinidia eriantha (wild kiwifruit): 130755275
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Entry
130755275 CDS
T09464
Name
(RefSeq) polyadenylate-binding protein 8-like
KO
K13126
polyadenylate-binding protein
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130755275
09123 Folding, sorting and degradation
03018 RNA degradation
130755275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130755275
03041 Spliceosome [BR:
aew03041
]
130755275
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130755275
mRNA cycle factors
Stress granule specific factors
130755275
Spliceosome [BR:
aew03041
]
Complex C
Other components
Complex C specific factors
130755275
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_occluded
RRM_5
RRM_Nup35
RRM_3
RRM_7
RRM_MARF1
RRM_10
PABC_AtC3H46
HPS3_C
Motif
Other DBs
NCBI-GeneID:
130755275
NCBI-ProteinID:
XP_057465659
LinkDB
All DBs
Position
19:complement(8707531..8716126)
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AA seq
642 aa
AA seq
DB search
MAQVQVQVPPQAVNAGGNQFVTTSLYVGELELNVTDSQLYDLFNQLGQVVSVRVCRDLTT
RRSLGYGYVNYTNPQDAARALEVLNFTPLNGKSIRIMYSHRDPSVRKSGAGNIFIKNLDK
AIDHKALHDTFSSFGNILSCKVATDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQ
VYVGPFLRKQERDMAMDKAKFTNVFVKNLSESTTEEDLKNIFGEFGTITSAVVMRDADGN
SKCFGFVNFENADAAARAVDALNGLNFDNKEWYVGKAQKKSDRELELKFRFEQSVKEAAD
KSQGLNLYVKNLDDSVGDDDLKELFSPFGTITSCKVMRDPNGISKGSGFVAYSTPEEASR
ALLEMNGKMVASKPLYVAHAQRKEDRRARLQVQFSPMRPVTMAPSVAPIMPIYPPGGPGL
GQQIFYGQGPPAIMPPQPGFGYQQQLLPGMRPGGAPMPNFFVPMVQQGQRPGGRRSGAVP
VQQGQQPVPLMQQQMLSRGRVYRYPPGRGLPDVSMSGVPGGMLSVPYDMGGIPLRDGGMS
QPIPIGALASALANASPADQRMMLGENLYPLVEQLEPEMAAKVTGMLLEMDQTEVLHLLE
SPEALKAKVAEAMEVLRNVQQQQAGNAADQLASLSLNDGLVS
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaggttcaggttcaggttccgcctcaggctgtgaatgctggtggaaaccagttc
gtgacgacgtcgctttatgtgggtgaacttgagctgaacgtgaccgattcgcagctatat
gatctgtttaaccagctgggtcaggtggtctctgttcgagtttgcagggacttgactacg
cggcgatcgctcggttacggctatgttaattatacaaatccccaagatgctgccagggca
ctggaggtgctgaacttcactcctcttaatggaaagtcaattaggataatgtattctcat
cgtgaccctagcgtacgcaagagtggggctggaaacatttttattaagaatttggacaag
gctattgaccacaaagcactgcatgacacattttcttcatttggaaatattctctcttgc
aaggtagctacagactcctctggtcagtcaaaaggctatgggtttgtccaatatgacagt
gatgaggctgcccaaaaagctattgagaagcttaatggtatgttgttgaatgataaacaa
gtatatgtgggacccttccttcggaagcaggaaagagatatggctatggacaaggcaaag
ttcaccaatgtctttgtaaaaaatctatcagaatcaacaacagaagaagatctgaagaat
atatttggtgaatttggaacaatcactagtgctgtggtgatgagggatgctgatgggaac
tctaagtgctttggttttgtcaactttgagaatgcagatgctgctgcacgagctgttgat
gctcttaacggactgaattttgataataaggagtggtatgttgggaaagcccaaaaaaaa
tcagacagggaacttgaattgaaatttcgatttgagcagagtgtgaaggaggcagcggac
aaatctcaagggctaaatctgtacgttaaaaatttagatgatagcgttggtgatgatgat
cttaaggaattattctctccatttggtaccataacttcctgcaaggttatgagagaccct
aatggaataagcaaaggatcagggtttgttgcatattctactcctgaagaggcatctaga
gctctattggagatgaatggcaagatggttgccagcaaacctctttacgttgcccatgca
caacggaaggaagatagaagggcaagattgcaggtgcaattttctccaatgcgtccagtt
acaatggcaccttcagttgctcctattatgccaatctacccccctggtggtcctggtctt
ggacaacaaatattctatggacaaggtccgcctgcgatcatgcctccccagcctggtttt
gggtatcagcagcaacttttaccaggcatgaggcctggtggggctcccatgccgaatttt
tttgtgccaatggtacagcagggtcagcgtcctggtggcaggcgttctggagctgttcca
gtgcagcagggccagcaaccagttccgcttatgcagcagcagatgctttcaaggggtcgg
gtctaccgttatcccccagggcgtggcctgcctgatgtttccatgtcaggtgttcctgga
ggcatgctttctgttccctatgatatgggtggcatacctttgcgtgacgggggaatgtct
caaccaattcccattggcgctttggcatctgcccttgccaatgcttctcctgcagaccag
aggatgatgctgggtgaaaatctgtatccactcgtggaacagctggagcctgagatggca
gctaaggtgactggaatgcttctggagatggatcagaccgaggttttgcatctgctggag
tcgccagaagctctaaaagcaaaggttgcggaggctatggaagtcctcaggaatgttcag
cagcagcaggccggcaacgccgctgatcaattggcctcactgtctttgaatgacggtctc
gtttcctga
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integrated database retrieval system
