Actinidia eriantha (wild kiwifruit): 130756425
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Entry
130756425 CDS
T09464
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein PRP4-like protein
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130756425
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130756425
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130756425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
NBCH_WD40
ANAPC4_WD40
WDR90_beta-prop_4th
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_EIPR1
PRP4
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_RIG_2nd
eIF2A
Beta-prop_Nup120_160
Beta-prop_SCAP
WD40_like
Nbas_N
Motif
Other DBs
NCBI-GeneID:
130756425
NCBI-ProteinID:
XP_057466922
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Position
20:complement(14931881..14940057)
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AA seq
591 aa
AA seq
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MDVDEENSFSTSVTEPSAAVTDGQTTVAAIDPILIQPVPIITPPGVPPIAPIVTPPIVPP
IATIITPPVVPPIASIPAVPPSIPRPLAPLPVHPPLPRPPKAQNGEVRGSDSDSDQDDSG
LNRINADYEVSEHSRQVRERQEKAMQELLMKRRAAALAVPTNDMSVRARHRRLGEPITLF
GEREMERRDRLRMLMAKLDAEGQLERLMKAHEDEEAAASVTKEEDEEEFQYPFYTEGSKA
LLKARLQIAKYSIPRAALRLQCARRKRDDPDEDLDAEIDWALKQAGSLVLDCSEIGDDRP
LSGCSVSHDGKMLATCAISGVAKVWSMPQVKKVSNLKGHTDRATDVAFSPTDNCIATASA
DRTARLWNTEGSLLKKFDGHLDRLARIAFHPSGRYLGTASYDKTWRLWDIDTGEELLLQE
GHSRSVYGLSFHHDGSLAASCGLDALARVWDLRSGRSILALEGHVKPVLGISFSPNGYHL
ATGGEDNTCRIWDLRKRKSLYIIPAHSNSISQVKFEPQEGYFLVTASFDTTAKVWSSRDF
KPVKTLSGHEARVTSLDVGGDGQYIATVSHDRTIKIWSSRDIIKEAAMEID
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggacgtggatgaggaaaattctttttcaacttcagttacagaaccttcagctgcagtc
actgatggtcagactacagttgctgcaattgatcctatcctgattcaaccagttccaata
attacacctccaggtgtacctcccattgctccaatagttacacctccaattgtacctcct
attgctactataattacacccccggttgtccctcccatcgcttcaatacctgcggttcct
ccctctattccccgtccattggcacccctccccgtacacccacctctccccaggccaccc
aaggcacagaatggtgaggtcaggggcagcgactctgactcggaccaagatgattcaggc
ctcaatcgtattaatgcagattatgaggtatcagaacatagtagacaggtgagagagagg
caagaaaaggccatgcaagaactattgatgaagcggcgtgctgccgcccttgcagtgcct
actaatgacatgtcagtacgggctcgtcaccgccggctaggtgaacctataacccttttt
ggcgaaagggaaatggaaagacgggaccgtttgcggatgcttatggcaaaactggatgct
gaagggcaactagaaaggctgatgaaagctcatgaggatgaggaggctgcagcttccgtg
acaaaggaggaagatgaagaagaatttcagtacccattttatactgaaggctctaaagca
cttttaaaggcccgattacagattgctaagtattctattccaagggcagctttgcgtctg
caatgtgcaaggaggaaaagggatgacccagatgaagatttggacgcagagatagattgg
gctttgaagcaagcagggagcttggtcttagattgcagtgaaataggagatgatagacca
ctttcgggatgttccgtttcacatgatggaaagatgcttgccacctgcgcaataagtgga
gttgccaaagtatggagcatgcctcaagtgaagaaggtttctaatttaaaaggtcataca
gatcgtgcaactgatgttgctttttctccaactgacaattgtatagcaactgcgtcggca
gaccggactgcaaggttatggaatactgaagggtctctcctaaagaaatttgatggccat
ttggatcgtcttgcacgaatcgcctttcatccatcaggaaggtacttgggaacagctagt
tatgacaagacttggagattatgggatatagatactggtgaggagttacttctccaagaa
ggtcacagtaggagtgtgtatggactatcttttcaccatgatgggtctttagcagcatct
tgtggtctggatgcacttgctcgtgtgtgggaccttcgttctgggagaagcattcttgcc
ttggaaggccatgttaagccggttctaggtatcagtttttctcccaatggttatcattta
gcaaccggtggtgaagataatacctgtagaatttgggacttaaggaaaagaaaatccttg
tacataataccggcacactcgaattctatctctcaagtcaaatttgagcctcaagaggga
tactttttggtaactgcgtcatttgatacgactgctaaggtttggtcatcaagagatttt
aagcctgtcaagacgttgtccggtcatgaagcaagagttacatcattggatgtaggagga
gatggacagtatattgcgactgtttcacatgaccggaccatcaaaatatggtcaagcaga
gacatcattaaagaagcggccatggaaattgactag
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