Actinidia eriantha (wild kiwifruit): 130757240
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Entry
130757240 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130757240
03036 Chromosome and associated proteins [BR:
aew03036
]
130757240
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
130757240
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
130757240
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
130757240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
MOV-10_beta-barrel
AAA_30
AAA_19
ResIII
UvrD-helicase
AAA_22
DEAD
AAA_16
LTD
NAT10_TcmA_helicase
ATPase_2
AAA
SLFN-g3_helicase
Mg_chelatase
AAA_24
DUF4221
AAA_7
Motif
Other DBs
NCBI-GeneID:
130757240
NCBI-ProteinID:
XP_057467964
LinkDB
All DBs
Position
20:7099053..7104859
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AA seq
901 aa
AA seq
DB search
MSLHLVVVLDYNQVMSSLQGKWDEEYSSIQDKGEIGFIDYEDDASVCTYDPDEEGPISIS
VPFPFVDGKPRSIFVGQTATDSISIKNTTREPVELWKVDIYDSKPADTFTVSLMEPPSAT
SDEEYIRSFLESFCLEDRVLQPGQTLTVWLSCKPQGVGLHTTAVHFDVGDDRIERVVLLL
ADDKISQSLVSNRPYRRDRKKKQLVVDASAGAEFVKGIRPARASTRVFKYRLPPYPIPNE
IRELVGNKVPDVITEGLMIDSYYPYFSSLLNMEEIKMEENMRDYDMECISFGRKGPFLTL
EVPGLAERRPSLIYGDYVFAKLASEDADDGTRPYQGYIHRVEAEQVHLKFDKYVHLRHKA
GNLYNVQFTYNRTSMRKLYQAIEVAKNLQTDFLFPSESSRKRRIRPASLSPLSCILNEEQ
KRSIRMILGCKGGPPYVIYGPPGTGKTMTIVEAILQLYIGQNNAQILVCAPSNSAADHXL
EKLIAEKAVEARENEILRLNATTRPCEDIKPELDRFCYLEESIYKCPPLSNLMQYKIIIS
TYMSASLLYAEGIGRTHFSHIFLDEAGQASEPETMIPLSHLCHKGTVVVLAGDPMQLGPV
IHSKDAESCGLGMSYLARLFECEFYNNLNENYVTKLVQNYRCHPAILHLPSELFYDGELI
ASRVDIASSTPWDDLLPNRDFPVLFIGIQGCDEREGNNPSWFNRFEASKVVDIVKKMTER
GLSGEDIGVITPYRQQVLKLYKALEILGCSDIKVGSVEQFQGQERQVIIISTVRSTVKHN
DFDRTHCLGFLSNPKRFNVAITRARSLLIVIGNPHIIGEDPYWNLLLKHCVDNSSYQGCD
LPKEKDDFHEDPMEKESDLGWKEEDCPQPSNEVESEGEPTNQAEEFPKPVFDEAEWSDGW
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgtctctacatttggtggttgtgctagattacaatcaggtgatgagctcacttcaagga
aagtgggatgaggagtattcttccatccaagataaaggagaaattggttttattgattat
gaagatgatgcatctgtttgtacatacgaccctgacgaagagggtcccatttctatatcc
gtcccattccctttcgtagatggaaagcctcgatcaatattcgtaggacagactgccact
gattcaatcagcattaagaataccactcgcgaaccggtggagctttggaaagttgatatc
tatgactcgaaacctgcggacactttcaccgtatctctaatggaacctccatcggcaact
tccgatgaagaatacatccgaagtttcctggagtctttttgcttggaagaccgggtttta
caaccgggtcaaactttaactgtttggctatcttgcaaacctcagggggttggcttgcac
acaacggcagtgcattttgatgtgggagatgataggattgaacgggtggttttgcttttg
gcagatgataagatctcccaatctttagtatcaaacaggccatatcgtagagaccggaaa
aagaagcagttggttgtggatgcatccgccggggctgaatttgttaaaggtatacgccct
gcaagggcttcaacccgggttttcaagtataggcttccaccatatccaatcccaaatgaa
atcagagaattggtaggaaataaggtccctgatgttataacagagggtttaatgatagat
agctattatccgtacttctcttctctattgaatatggaagaaataaaaatggaggaaaac
atgagggattatgacatggaatgcatctcttttgggaggaagggaccatttttgaccctc
gaggttccaggactagctgagagacggccttcgctcatttatggagattacgtatttgct
aagcttgcctctgaagacgcagatgatggaactcgtccatatcagggttatatccaccgt
gttgaggctgaacaagtccacctaaagtttgataaatacgttcacttgcgtcataaagct
gggaacctctataatgtgcaattcacttacaatcgaacaagcatgagaaaattgtatcag
gctattgaagtcgcgaagaatttacaaacagactttctcttcccatccgagtcctctaga
aagagacggattagacctgcttctctgtcccctctgtcttgtatccttaatgaagagcaa
aagcggtccattaggatgattctgggctgcaaaggcgggccaccttatgtgatctatggc
cctcctggtacaggaaagaccatgacaatcgtagaagcaattcttcagctctatataggg
caaaataatgcccagattcttgtttgtgcaccttcaaatagtgcagcagatcatnnacta
gagaaattaattgcggagaaggccgttgaagctagagagaatgagatactgaggcttaat
gcaactactcggccttgtgaggatattaagccagagcttgaccggttttgttatttggaa
gagtcaatctataagtgtcctccacttagtaacctaatgcagtataagatcatcatatct
acatatatgagtgcttctcttctttatgcagaaggcattggtcggacccacttctctcac
attttcttggatgaggctggccaagcttcagagccggaaaccatgattcctctgtcacac
ctttgccacaagggaacagtagttgttcttgctggagacccaatgcaactaggcccggta
attcactccaaagatgctgaaagttgtggattgggaatgtcatacttggctaggctcttt
gaatgtgagttctataacaatctcaatgagaattatgtcacaaagttggttcaaaattac
cgatgtcaccctgcaattctccatctcccatcagagttgttttatgatggagaattaatt
gcatcgagagttgatattgcttcctccacaccttgggacgacctccttcctaatagggac
tttcctgtccttttcattgggatccaaggatgtgacgagcgggaaggaaataacccatcg
tggtttaaccgatttgaggcaagcaaggtcgttgatattgtcaagaaaatgacagaaagg
gggttgagtggggaagatattggagtcataactccttaccgtcagcaagtgctcaaatta
tataaagcccttgaaatcttgggttgctctgatattaaggttggtagtgttgagcaattt
caaggacaagaaagacaagtaattatcatatctactgtccgatcaacggtcaagcacaat
gactttgacagaactcattgcttgggatttttgagcaatcccaaaaggttcaatgttgcc
attactcgtgccaggtctttactgattgttattgggaatccgcacatcattggcgaggat
ccatactggaatttgctcttgaagcattgtgttgataacagctcctatcaggggtgtgat
ctccctaaagagaaagacgattttcacgaggaccccatggaaaaagagagcgatttgggc
tggaaagaggaagactgtcctcaaccctctaatgaagttgaatcagaaggagagccgacc
aatcaggcagaggagttccctaaacctgtctttgatgaagctgaatggtcagatggatgg
aagtag
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