Actinidia eriantha (wild kiwifruit): 130757308
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Entry
130757308 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC130757308
KO
K14794
ribosomal RNA-processing protein 12
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aew03009
]
130757308
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
90S particles
Other 90S particles
130757308
Pre-60S particles
Other pre-60S particles
130757308
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_RRP12_N
RRP12_HEAT
TPR_IMB1
DUF7097
Motif
Other DBs
NCBI-GeneID:
130757308
NCBI-ProteinID:
XP_057468052
LinkDB
All DBs
Position
20:complement(20388439..20403895)
Genome browser
AA seq
1284 aa
AA seq
DB search
MEGLEVQEPPSYSPEVPEDFCSSVLSQFSNSAEEHHRHLCAVIGAMSQELKDQNLPLTPI
AYFGATCSSLDRLATETEPPSHAVDALLTLLSMLIPRISAAILKKKTEFLSDLVVRILRS
KSVTPGAAASGLKCISHLLVIGHKSSWSDVSSLYGALLGYITDGRPKVRKQSHISLCVVL
LSFQKTAVLAPASEEITNIFERFLLLAGGSNASASEGPKGAQEVLYVLDALKDCLPLLSL
KFSTSILKYFKSLLELRQPLVSRRITSSLNALCLHPTLEVSPELLLDLLCSLGLSISAND
MSADDMTVAVRLLDVGMSKVYALNRQICIVKIPLIFNALRDIFTFEHEEALRVATEAFKS
LIHACIDESLIKQGVDQIGASANVDTRKSGPTIIEKVCATIESLFDYHYAAVWDLSFQVA
STMFDKLGYSSSYLLKGTLKNLADMQKLSDEDFPYRKQLHDCIGSALGAMGPETFLNIIP
LKLDAKDLSEANVWLFPILKQYTIGARLDYFTESILAMVRLVRKKSQILEQEGRIYSSRS
VDGLVYSLWSLLPSFCNYPLDTAESFKDLEKALCTALDEEPDVRGVICSSLRILIQQNKR
ISEGKDGLSGFEVSIPRQQAVAHYTPQFAADNLDALRSSSPMLFSVLSRIFMKSSKDTGG
CLQTTISELASIADKKVVIRFFRNTMEKLLKVTKEADEAENSRSSNLMQIDSLLNGSSLS
LVRAQLFDLAVAFLPGLDASWIDLLFVATKPLLKDAEGLIQKKAYKVLSVILMNSDEFLS
TNVKELLSLMIEVLPSCHFSAKRYRLDCLYFLIVHASKDESEQMPRDIVTSFLTEIVLAL
KEANKKTRNRAYDILVQIGHAFGDEEKGGNKENLHQFFNMVAGGLAGETPHMISAAVKGL
ARLAYEFSDLISAAYNVLPSTFLLLQRKNREIVKASLGLLKVLVANSQAEGLQLHLSGMV
EGLLKWQDGTKNHFKAKIKILLEMLVKKCGLDAVKAVMPEEHMKLLTNIRKIRERKERRV
AANSEESKSHQSKATTSRLSRWNHTKIFSDFSDEETVSDAENKNVKTVSGRWSKASTLLT
SKATSFRSKRTRKAAKSLPEDLFDKLEDEPLDLLDRQKTRSALRSSEYLKRKPDSDDEPE
IDSEGRLIIREGGKKQKREMSPDPDSDGRSRAGSYVSYKSSQKVQKRRKTSETGWAYMGS
EYASKKASGDVKRKGKLEPYAYWPLDRKMMSRRPEQRAAARKGMASVVKMTKKLEGKSAS
SVLSIKGLKFKKAKQRGSQKKNRQ
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggaaggtctggaagtgcaagaaccaccgtcttactccccagaagttcccgaggacttc
tgcagttcagtcctctctcaattcagcaactccgcggaggagcaccaccgccacctatgc
gcagtaattggcgcaatgtctcaggagctcaaggaccagaaccttcctctcacccccatc
gcctacttcggcgccacctgctcctctctcgaccgactcgctaccgagaccgagccgccc
agccacgccgtcgacgccctcctcaccctcctctccatgcttatccctcgaatatccgcc
gccattttgaagaagaaaactgaattcttatcagaccttgtggttcgaatcctgcgttcg
aaatcggtcactcctggcgcagccgcgtcagggttaaaatgcatttcgcatctgctggtc
atcggacataaatcctcttggtccgatgtgtcctcgctctatggagctcttctaggctat
ataacagacggccgtcccaaggtccggaagcagtcccatatttctctctgtgttgtcctg
cttagttttcaaaaaacggcggtgctggctcctgcaagtgaagaaatcacaaacatcttt
gaaaggtttctgctgcttgcgggtggatcaaatgcaagtgcttcagaagggcccaaagga
gctcaggaggtcttatatgttctggatgctcttaaagattgtcttcctcttttgtccctt
aagttctcaactagcatcctgaagtacttcaaatctctgctggaactacggcaacccctt
gttagcaggcgcataacaagcagtttgaatgcactttgtctccacccaactttagaagtt
tctcctgaactgctgttggatcttttatgctcattaggtctttctatctcagcaaatgac
atgtctgcagatgacatgaccgttgcggttaggctgcttgatgttggaatgtcaaaggtt
tacgctcttaacaggcaaatctgcatagtcaaaatccctctcatcttcaatgcacttaga
gatattttcacatttgaacatgaggaggccttacgtgtagccactgaagctttcaaaagt
ctaattcatgcatgtattgatgaaagcttgatcaaacagggagtagatcagattggggca
agtgcaaatgtggacacaagaaagtctgggccaaccatcattgaaaaagtttgtgcaacc
attgagagtttgtttgattatcactacgctgcagtctgggacttgtcgtttcaagttgct
tcaacaatgtttgataaattaggatattcttcttcttacttattgaagggaacacttaag
aacttggcagatatgcagaaattgtcagatgaagacttcccttacagaaagcagctgcat
gattgcattggatcagctcttggtgccatgggtcctgaaacattcttaaatatcatacca
cttaagttggatgcgaaagatttatccgaggctaatgtgtggctctttccaattctaaag
caatatactattggtgcccgtttagactactttacagagtcgattttggctatggttcga
cttgtaaggaagaaatctcaaatacttgagcaagaaggaaggatttattcgtcaagaagt
gtagatggacttgtatactctttatggtccttgctgccttctttttgcaattaccctctg
gatactgctgaaagcttcaaggacttagagaaagcattatgcactgctcttgacgaggaa
cctgatgtacgtggagtaatatgctccagtttgcggatcctcatccagcagaataagaga
atttcagaaggaaaagatggtctatctggttttgaagtaagcattcccagacagcaagct
gtggctcattatactccacagttcgcagctgataatttggatgcactgaggtcgtcctcc
cctatgttattttccgtcctatcaagaatcttcatgaaatcatcaaaggacacaggtgga
tgcttgcagaccacaatcagtgagctagcttcaatagcggataaaaaagttgttataagg
ttcttcagaaatacaatggagaagctcttgaaggttacaaaagaagctgacgaagcagaa
aactcccgaagttccaatctgatgcagattgacagcctattaaatggaagttcactgtca
ctagtaagggcacagttgtttgacttggcagtggcctttctccctggtttagatgcaagt
tggattgatcttttgtttgtcgcaacaaagcctctattgaaggatgctgagggcttgatc
caaaagaaagcatacaaagttctctcagttattctcatgaattctgatgagtttctttca
acaaatgtcaaggagttgcttagtctgatgattgaagtgctgccttcgtgtcatttttcg
gctaaacgttaccggctcgattgtttgtacttcctaattgtccatgcctcgaaggacgaa
tcggagcagatgccacgcgacatcgttacttctttcttaacagaaattgtacttgcacta
aaagaggctaataaaaagacgagaaatagagcttatgacatccttgtccaaattggccat
gcctttggggatgaagaaaaaggtggaaataaggaaaacttgcatcaatttttcaacatg
gtagctgggggccttgctggcgagactcctcatatgatcagtgcggcagtgaaaggctta
gctcgcttggcttatgaattttctgatcttatttctgctgcctataatgttctcccatct
acgtttctcctcctccagagaaagaacagggaaattgttaaagctagtcttggtctattg
aaggtattggtggccaattcacaggctgagggattgcaattgcatttaagtggcatggtt
gaaggtctgctgaagtggcaagatggcaccaagaaccattttaaagccaagattaagatt
ctccttgaaatgctagtcaagaaatgtggtttggatgctgtcaaggctgtaatgcctgaa
gaacacatgaaacttctcactaatatacgaaagattagggaaaggaaggaaaggagagtt
gctgctaactccgaggaaagcaaaagtcatcaatcaaaagcaactacgtccaggctgagc
aggtggaatcatacaaaaatattttctgattttagtgatgaagaaacagtcagtgatgca
gaaaacaagaatgtgaagacagtttctggtcgctggagcaaggcttctactctgttaacc
tccaaagcgacttctttccggtccaagagaacccgtaaagcagccaagagcttgccagaa
gacttgtttgacaaattggaggatgagccgcttgacttgcttgaccgtcagaagacaagg
tcagctcttcgatcatctgaatatctaaaacggaagccagattcagacgacgagccagag
atcgactctgaagggcggttgattattcgggagggagggaagaaacagaagagggaaatg
tcacctgaccctgattctgatggaaggagccgagcaggtagttacgtgtcctataaatcc
tcacagaaagtgcaaaagcgaaggaaaacatcagaaactggatgggcttacatgggaagt
gagtatgctagcaagaaggcaagtggggatgtgaagaggaagggcaagcttgagccctat
gcatattggccacttgatcgcaaaatgatgagccgtagaccagagcagcgagcagctgca
aggaaaggcatggcaagtgtggtaaagatgacaaagaagcttgaaggcaagagtgcctca
agtgtcctttccatcaagggcttgaagtttaagaaggcaaaacagagaggcagccagaag
aaaaacaggcaatga
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