KEGG   Actinidia eriantha (wild kiwifruit): 130758243
Entry
130758243         CDS       T09464                                 
Name
(RefSeq) replication factor C subunit 2
  KO
K10755  replication factor C subunit 2/4
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03030  DNA replication
aew03410  Base excision repair
aew03420  Nucleotide excision repair
aew03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130758243
   03410 Base excision repair
    130758243
   03420 Nucleotide excision repair
    130758243
   03430 Mismatch repair
    130758243
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aew03032]
    130758243
   03036 Chromosome and associated proteins [BR:aew03036]
    130758243
   03400 DNA repair and recombination proteins [BR:aew03400]
    130758243
DNA replication proteins [BR:aew03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    130758243
  DNA Replication Termination Factors
   ELG1-RFC complex
    130758243
Chromosome and associated proteins [BR:aew03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    130758243
DNA repair and recombination proteins [BR:aew03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     130758243
  Check point factors
   HRAD17(Rad24)-RFC complex
    130758243
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid AAA_22 Rad17 RuvB_N AAA_16 AAA_11 Mg_chelatase AAA_5 AAA_assoc_2 DUF3802 AAA_14 ResIII AAA_2 nSTAND3 AAA_24 SLFN-g3_helicase DUF3853 PhoH AAA_28 DNAX_ATPase_lid AAA_7 DUF815 AAA_19 RNA_helicase T2SSE AAA_30 AAA_25 NPHP3_N Parvo_NS1 NB-ARC AAA_18 TIP49_C bpMoxR IstB_IS21 TIP49 ATPase_2 CPG4
Other DBs
NCBI-GeneID: 130758243
NCBI-ProteinID: XP_057469066
LinkDB
Position
21:10195454..10203962
AA seq 341 aa
MAPVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGRQGGYPCPPFKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDIMTG
RLLHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSKDLISVSGVIP
QEVVQALFAACRSSNFDLANKEVTNVIAEGYPVSQMLSQLFEVVVIADDISDEQKAKICK
KLAEVDKCLIDGADEYLQLLDAASITMRVLCNMPLELTYEN
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggcgccagtaatgcagagctcacagccatgggtcgagaaatatcgaccgaagcaagtg
aaggacgtagctcaccaggacgaggtcgttcgtgtcctcacaaacactctcgagaccgct
aattgcccgcatatgctgttctatggtccacctggtacaggaaaaaccacgacagccctt
gccatagcccaccagctttttggacctgaactctacaagtcgagggtactggagcttaat
gcaagtgatgatcgtggaattaacgtagttcgcacaaaaataaagaactttgctgctgtt
gctgtaggttctggacgtcaagggggctatccttgcccaccttttaagataatcatccta
gacgaggcagattccatgaccgaagatgctcagaatgctttgaggcgtacgatggaaact
tactccaaagtcacgagattctttttcatttgtaattacattagcaggatcatagagccg
cttgcttctcgatgcgcaaagtttaggttcaaaccgctttcagaagacatcatgactggt
cgtttattgcacatttgcaaagaggaaggcctcaatctggactcggaggctctttcgacc
ttaagttccatctcacaaggtgatcttcgtcgggctataacatacttacagggagctgcc
cgtttatttggatcatctatttcttctaaggacttgatcagtgtgtcaggggtcatccct
caggaggttgttcaggctctttttgcagcttgcaggagtagtaattttgacttggcaaac
aaggaagtcaccaacgtaattgcagagggatatccagtttctcagatgctttctcagttg
tttgaggtagtcgtcatagctgatgatatttcagatgaacaaaaagcaaaaatatgcaag
aaattagccgaagtggataagtgtctgattgatggagcagatgagtatttgcagctgttg
gatgccgccagcataaccatgcgagtactttgtaacatgccactagaacttacatacgag
aattag

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