Actinidia eriantha (wild kiwifruit): 130758243
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Entry
130758243 CDS
T09464
Name
(RefSeq) replication factor C subunit 2
KO
K10755
replication factor C subunit 2/4
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03410
Base excision repair
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130758243
03410 Base excision repair
130758243
03420 Nucleotide excision repair
130758243
03430 Mismatch repair
130758243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aew03032
]
130758243
03036 Chromosome and associated proteins [BR:
aew03036
]
130758243
03400 DNA repair and recombination proteins [BR:
aew03400
]
130758243
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130758243
DNA Replication Termination Factors
ELG1-RFC complex
130758243
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
130758243
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130758243
Check point factors
HRAD17(Rad24)-RFC complex
130758243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
RCF1-5-like_lid
AAA_22
Rad17
RuvB_N
AAA_16
AAA_11
Mg_chelatase
AAA_5
AAA_assoc_2
DUF3802
AAA_14
ResIII
AAA_2
nSTAND3
AAA_24
SLFN-g3_helicase
DUF3853
PhoH
AAA_28
DNAX_ATPase_lid
AAA_7
DUF815
AAA_19
RNA_helicase
T2SSE
AAA_30
AAA_25
NPHP3_N
Parvo_NS1
NB-ARC
AAA_18
TIP49_C
bpMoxR
IstB_IS21
TIP49
ATPase_2
CPG4
Motif
Other DBs
NCBI-GeneID:
130758243
NCBI-ProteinID:
XP_057469066
LinkDB
All DBs
Position
21:10195454..10203962
Genome browser
AA seq
341 aa
AA seq
DB search
MAPVMQSSQPWVEKYRPKQVKDVAHQDEVVRVLTNTLETANCPHMLFYGPPGTGKTTTAL
AIAHQLFGPELYKSRVLELNASDDRGINVVRTKIKNFAAVAVGSGRQGGYPCPPFKIIIL
DEADSMTEDAQNALRRTMETYSKVTRFFFICNYISRIIEPLASRCAKFRFKPLSEDIMTG
RLLHICKEEGLNLDSEALSTLSSISQGDLRRAITYLQGAARLFGSSISSKDLISVSGVIP
QEVVQALFAACRSSNFDLANKEVTNVIAEGYPVSQMLSQLFEVVVIADDISDEQKAKICK
KLAEVDKCLIDGADEYLQLLDAASITMRVLCNMPLELTYEN
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcgccagtaatgcagagctcacagccatgggtcgagaaatatcgaccgaagcaagtg
aaggacgtagctcaccaggacgaggtcgttcgtgtcctcacaaacactctcgagaccgct
aattgcccgcatatgctgttctatggtccacctggtacaggaaaaaccacgacagccctt
gccatagcccaccagctttttggacctgaactctacaagtcgagggtactggagcttaat
gcaagtgatgatcgtggaattaacgtagttcgcacaaaaataaagaactttgctgctgtt
gctgtaggttctggacgtcaagggggctatccttgcccaccttttaagataatcatccta
gacgaggcagattccatgaccgaagatgctcagaatgctttgaggcgtacgatggaaact
tactccaaagtcacgagattctttttcatttgtaattacattagcaggatcatagagccg
cttgcttctcgatgcgcaaagtttaggttcaaaccgctttcagaagacatcatgactggt
cgtttattgcacatttgcaaagaggaaggcctcaatctggactcggaggctctttcgacc
ttaagttccatctcacaaggtgatcttcgtcgggctataacatacttacagggagctgcc
cgtttatttggatcatctatttcttctaaggacttgatcagtgtgtcaggggtcatccct
caggaggttgttcaggctctttttgcagcttgcaggagtagtaattttgacttggcaaac
aaggaagtcaccaacgtaattgcagagggatatccagtttctcagatgctttctcagttg
tttgaggtagtcgtcatagctgatgatatttcagatgaacaaaaagcaaaaatatgcaag
aaattagccgaagtggataagtgtctgattgatggagcagatgagtatttgcagctgttg
gatgccgccagcataaccatgcgagtactttgtaacatgccactagaacttacatacgag
aattag
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