Actinidia eriantha (wild kiwifruit): 130758347
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Entry
130758347 CDS
T09464
Name
(RefSeq) THO complex subunit 5A isoform X1
KO
K13174
THO complex subunit 5
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130758347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130758347
03041 Spliceosome [BR:
aew03041
]
130758347
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130758347
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130758347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
NYD-SP28
Motif
Other DBs
NCBI-GeneID:
130758347
NCBI-ProteinID:
XP_057469198
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Position
21:complement(3708938..3716009)
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AA seq
818 aa
AA seq
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MEVTMEDGEVVEAEVAELAPQRKIERSAYDMLQQSKASVEEIVAQMISIKREGKPKSELR
ELVTQMFLNFVTLRQANRSILLEEDRVKAETERAKAPVDFTTLQLHNLMYEKNHYVKAIK
ACRDFKSKHPDIQLVPEEEFFSDAPEDIKSSVISNDSAHNLMLKRLNFELFQRKELCKLH
EKLEQQKQKLANTIANRKKFLSSLPSHLKSLKKASLPVQHQLGVLHTKKLKQHHLAELLP
PPLYVIYSQFLAQKEAFGENIDMEIVGSVKDAQTFARQQATKDPGISTNVENSKFEDDAP
EEDDDGQRRRKRPKKVPGKENLDQTGIYQAHPLKIILHIHDDDNSEPKSAKLITLKFEYL
LKLNVVCVGIEGSNEGPENNILCNLFPDDTGLELPHQSAKLRVGDALTFDERRTSRPYRW
TQHLAGIDFLPELSPLLIGDETPASETAKNAAVMSGLSLYRQQNRVQTVVQRIRSRKKAQ
LALAEQLDLLSKLKWSSLTCESVPWALHMPLCSLHGWSQIGSSPNNASSSLLVDVEQGQG
PLSIDMNERSDASKEEVENVREDGELPSLVPVSAVVNDAKVTPPKGSDLEHSKRLSLISK
SMVSPIGMPKSLSFKKNDDDSEIMLDSESDLDEAVQIDQDTGNAAGIGCLEMVENFWADY
GVQEYCLVLTRTVDDNKRNMKLEAKIKVSMEFPLRPPYFTLSLSTALLEENCSERDCSEW
YNELRAMEAEVNVHILKLVPLDQDNFILAHQVRFLAMLFDFYMDEGGPGSEKRKGTSVLD
VGLCKPVSGRLLARSYRGRDRRKMISWKDSECAPGYPY
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgacgatggaagacggagaggtggtcgaagcggaagttgcagagttagctcct
cagcgcaagatagagaggtcggcgtacgatatgctgcagcagagcaaggcttcggtggag
gagatcgtggcccagatgatctctataaagagagaaggcaagcccaaatctgagctccga
gagctcgtcactcagatgttcctcaatttcgtcactcttcgccaggcaaatcgttccatc
ttgcttgaagaagatcgtgtaaaagcagaaactgagcgtgcaaaagcacctgtggacttc
acaacgttgcagctccataacttgatgtatgagaaaaatcattatgtcaaagcgataaag
gcttgcagagacttcaagtctaaacatcctgatattcaacttgtgcccgaggaagagttt
tttagtgatgcacctgaagatattaaaagctccgtaatatcaaatgacagtgcacacaat
ttgatgctcaagaggctcaatttcgagttgttccagcgtaaagaattatgcaaacttcac
gagaaactcgaacaacaaaagcaaaagcttgcgaataccattgctaacaggaagaaattc
ttgtcaagtctcccttcgcacctcaagtcgcttaagaaagcatcattgccagtgcagcac
caacttggggttctgcatacaaagaaactaaagcagcatcacttggcagagttgcttccc
cctcctctttatgtgatttactcacagttcttggcccaaaaggaagcatttggagaaaac
attgatatggagattgtaggaagtgtgaaggatgctcaaaccttcgctcgccagcaagca
actaaagaccctggcatttctaccaacgtagagaattccaagttcgaggatgatgctcct
gaagaggacgatgatggacaaaggaggagaaagcggccaaagaaggttccaggcaaagag
aaccttgaccagacaggcatatatcaagctcacccgcttaaaatcattctccatatacac
gatgacgacaattctgagcccaagtctgcaaaactaatcacgctgaagtttgaatacttg
ttaaagttgaatgttgtatgtgttgggattgaaggctccaacgaaggacctgagaataac
atcttatgcaacttgttccccgatgatactggccttgagcttccacaccagtcagccaag
ctccgtgttggtgatgccctgacatttgatgaaaggagaacatcgcgtccgtataggtgg
acccagcatttggctggaattgattttttgccagagctatcaccattgcttataggcgat
gaaactccagccagtgaaacagctaaaaatgccgcagttatgtctggtctctccctatac
cgtcagcagaatcgcgtacagacagttgtgcaaaggattcgatctcggaaaaaggcacag
ctggctcttgcggaacagcttgatttactttcaaagcttaaatggtcttctctgacttgt
gaaagcgttccatgggccttacatatgcctttatgcagtttgcatggttggtcacaaata
ggatcttcacctaataatgcttcatcttcgcttcttgttgatgtggaacaagggcagggt
cctttaagcattgatatgaatgaaaggtctgatgcttcaaaggaagaggtggaaaatgta
agggaagatggggaacttccatctttagtcccggtatcagctgtcgtaaatgatgctaaa
gtcactcctccaaaaggatctgacctggagcactccaaacgtctgtctttgatttcaaag
agtatggtttctccaatcggcatgccaaaatctctaagtttcaagaaaaatgatgacgat
tcagaaatcatgctagattctgaaagtgatctagacgaggctgtgcaaattgatcaggat
acaggaaatgcagcggggattgggtgcctcgaaatggttgaaaatttttgggcagactat
ggtgtgcaggaatattgccttgttttaactaggacagtggatgataacaagaggaacatg
aagttagaagccaagattaaggtaagcatggagtttcctcttaggcctccttattttaca
ctcagtctttccactgcattgctcgaggagaattgttctgagagagattgttctgagtgg
tacaatgaacttcgtgccatggaagctgaggtcaatgttcatatattaaagttggtacct
ttggatcaagataacttcatcttagcccatcaagtgcgatttctggcaatgctttttgac
ttttacatggatgaaggaggcccgggttcagaaaaaagaaaaggtacgtctgtgcttgat
gtaggtttgtgcaagcctgtaagtggtagactacttgccagatcttataggggaagggat
cgtaggaagatgatttcctggaaggacagtgagtgtgcccccggctatccttattag
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