KEGG   Actinidia eriantha (wild kiwifruit): 130758358
Entry
130758358         CDS       T09464                                 
Name
(RefSeq) protein ANTHESIS POMOTING FACTOR 1
  KO
K14962  COMPASS component SWD2
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    130758358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130758358
   03036 Chromosome and associated proteins [BR:aew03036]
    130758358
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     130758358
Chromosome and associated proteins [BR:aew03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     130758358
    COMPASS/SET1 complex (yeast)
     130758358
SSDB
Motif
Pfam: WD40_Prp19 WD40_WDHD1_1st WD40 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 EIF3I Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_SPT8 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_WDR75_1st Beta-prop_DCAF4 Beta-prop_IFT140_1st KNTC1_N Cytochrom_D1 Beta-prop_WDR35_TULP_N VPS11_N
Other DBs
NCBI-GeneID: 130758358
NCBI-ProteinID: XP_057469217
LinkDB
Position
21:18037616..18047062
AA seq 332 aa
MAGGQSEREDKVSLELAEEILQSMEVGMAFRDYNGRISSMDFHRTSSYLVTASDDESIRL
YDVANATCLKTINSKKYGVELVCFTSHPTTVIYSSKNGWDESLRLLSLHDNKYLRYFKGH
HDRVVSLSLCSRKECFISGSLDRTVLLWDQRAEKCQGLLRVQGRPATAYDDQGLVFAVAF
GGYIRMFDARKYEKGPFDIFSVGGDMSEANVIKFSNDGRLMLLTTADGHIHVVDSFRGTL
LSTFNVKPVLSNSTLEASFSPEGMFVISGSGDGSVYAWSVRSGKEVASWMSSQNEPPVIK
WAPGSLMFVTGSSELSFWIPDLSKLGAYVGRK
NT seq 999 nt   +upstreamnt  +downstreamnt
atggcggggggacaatcagagagagaagacaaggtctcgttagagctcgccgaagaaatc
cttcagagcatggaagttggcatggcctttcgtgattacaatggtagaatcagttcaatg
gatttccataggacatcaagttatttggtgactgctagtgatgatgaatccattcgccta
tatgatgttgccaatgctacgtgtttgaagacaattaatagcaaaaaatatggggttgaa
ctagtttgctttacttctcatcccacaacagttatatactcctcgaagaatggttgggat
gaatcattgcggcttctctcattgcatgacaacaaatacttgcgatacttcaaaggtcac
catgacagggttgtctcactaagtttgtgctcccgaaaagaatgctttatctctggctct
ctggatcgaacagttttactttgggatcaaagagctgagaagtgtcagggacttttacga
gtacaaggtcggcctgcaacagcctatgatgatcaagggcttgtctttgcagttgctttt
ggaggatacataaggatgtttgatgctcggaagtatgaaaagggcccttttgacatattt
tctgttgggggagatatgtctgaagcaaatgttatcaaattcagtaatgatgggagactt
atgcttctgacgactgcagacgggcatattcatgttgttgattcatttcgtggcacactt
ttatccacattcaatgtcaagccagttttaagcaattccactttggaggcatctttcagc
cctgagggaatgtttgttatatcaggttcaggtgatggtagtgtttatgcctggagtgtt
cgtagtggcaaagaagttgccagttggatgagttctcaaaatgaacctcctgtgataaaa
tgggctccaggaagcctaatgtttgtcactggttcttctgaattatcattttggattcca
gacttatccaaattgggagcttatgttggaagaaaatag

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