Actinidia eriantha (wild kiwifruit): 130758939
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Entry
130758939 CDS
T09464
Name
(RefSeq) polyadenylate-binding protein 2-like
KO
K13126
polyadenylate-binding protein
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130758939
09123 Folding, sorting and degradation
03018 RNA degradation
130758939
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130758939
03041 Spliceosome [BR:
aew03041
]
130758939
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
130758939
mRNA cycle factors
Stress granule specific factors
130758939
Spliceosome [BR:
aew03041
]
Complex C
Other components
Complex C specific factors
130758939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RRM_occluded
RRM_3
RRM_Nup35
RRM_7
RRM_10
DUF4523
PABC_AtC3H46
Motif
Other DBs
NCBI-GeneID:
130758939
NCBI-ProteinID:
XP_057469946
LinkDB
All DBs
Position
21:complement(3875342..3883656)
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AA seq
655 aa
AA seq
DB search
MAQIQVQHQAHVSAGNGAAATAANGGGANQYVTTSLYVGDLDVNVTDSQLYDLFNNLGQV
VSVRVCRDLSTGRSLGYGYVNYSNPQDAARAMEVLNFTPLNGKSIRVMYSHRDPSIRKSG
TANIFIKNLDKAIDNKALHDTFSSFGNILSCKIATDHSGQSKGYGFVQFENEESAKNAID
KLNGMLMNDKQVYVGHFLCKQERDIALNKTIFNNVYVKNLSESTTEEDLKKIFGEYGTIT
SAVVMRDGDGKSKCFGFVNFENAAAAAKAVEALNGKIVDDKDWYVGKAQKKYERELELKS
RFEQSAKEVGDKFQGLNLYVKNLDDSIDDDKLKELFSEFGTIISCKVMRDPSGISRGSGF
VAFSTNEEASSALAEMNGKMIVSKPLYVALAQRKEERKARLQAQFSQMRPVPMGPSMAPP
MPMYPPGAPGLGQQLFYGQAPHAIIPPQAGFGYQQQLVPGMRPGGAPMPNFFMPLVHQGQ
RPGGRRGSGPVQQAQHPVPLMQQQMLPRGRVYRYPLGRNMQEVPMPGVAGGMLSAPYDMA
HMGGMLPRDAGIGQPMPVPALATALANAPPDQQRTMLGENLYPLVDKLEHEHAAKVTGML
LEMDQTEVLHLLESPDALRAKVAEAMDVLRNVAHQQANIATDQLASLSLNDHLVS
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggctcagattcaggtgcagcatcaggctcacgtttcggcggggaacggggcggctgcg
acggcggcgaacggcggtggagcgaaccaatacgtgacgacgtcgctttacgttggggac
ttggacgtcaacgtcaccgactcgcagctctatgatctgttcaacaatctgggacaggtc
gtgtcggttagggtttgtagggacctgagcactggccgatctctgggttatggctacgtc
aactacagcaatccgcaagatgcggcaagggcaatggaagtacttaacttcactcccctc
aatggcaagtctatcagagttatgtattctcatcgggaccccagtattcgtaaaagtggg
actgcaaatatatttatcaagaatttggacaaagcaattgacaacaaagcattacacgat
actttttctagctttggaaacattctgtcttgcaagatagctacagatcattctggccag
tctaaaggctatggttttgtacaattcgaaaatgaggaatctgctaaaaacgcaatagat
aagttaaatggcatgctcatgaatgataaacaagtatatgtggggcattttctttgtaag
caagaaagagatattgccttgaacaagacaatttttaataatgtttatgtgaaaaatctc
tcggaatcaacaaccgaagaggatctaaagaaaatatttggtgaatatggaacaattact
agtgcggtagtgatgagggatggtgatgggaaatctaagtgttttggatttgtcaacttt
gaaaatgctgctgctgctgctaaagctgttgaggctctaaatggtaaaatagtcgatgat
aaggactggtatgtagggaaagcccagaagaaatatgaaagagagcttgaactaaaaagt
cggtttgagcagagtgccaaggaagtaggagacaaatttcagggtttgaatttgtatgtc
aagaacttggatgacagcattgatgatgataaactgaaggaactattctcagaatttggc
accattatttcatgcaaggttatgcgcgatcctagtggaataagtagaggttcaggattt
gttgccttctctactaatgaagaagcatctagtgctcttgcagagatgaatggtaaaatg
attgtaagcaagcctctctatgttgctcttgcccaacggaaagaagagagaaaagcaagg
ttgcaggcacagttttcacaaatgcggccagttccaatggggccatcaatggctcctcct
atgccaatgtatcccccgggtgctccaggtcttgggcaacagttattttatggacaagct
ccccatgctattattcctccccaggctggatttggctatcagcagcaacttgttcctgga
atgaggccaggtggggctcctatgccgaatttcttcatgccgttggtccatcagggccag
cggcctggtgggagacgaggatcaggtcccgtgcaacaagcgcagcatcctgtgccattg
atgcaacagcagatgcttccaagaggacgtgtgtatcgttatccacttggtcgcaacatg
caagaagttcccatgcctggagttgctggaggcatgctttctgctccatatgacatggcc
cacatgggtggcatgctaccgcgagatgctggtattgggcagcccatgccagttccggct
ttggctactgcccttgcaaatgcaccgcctgatcagcagagaacgatgctgggtgaaaat
ctgtacccgcttgtggataagctggagcatgagcatgctgccaaggtgacaggcatgctt
ttggagatggaccagactgaagtcttgcatttacttgaatcaccagacgcattgagagcg
aaagttgcagaggctatggatgtgctcagaaatgttgctcatcagcaggccaacatcgca
actgaccagctagcatctctgtccctgaatgaccaccttgtttcctga
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