Actinidia eriantha (wild kiwifruit): 130760286
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Entry
130760286 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130760286
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
130760286
Spliceosome [BR:
aew03041
]
Complex C
Other components
Complex C specific factors
130760286
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Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_22
HA2_N
AAA_19
AAA_30
Cas3-like_C_2
ResIII
AAA_7
nSTAND3
T2SSE
AAA_29
AAA_23
Motif
Other DBs
NCBI-GeneID:
130760286
NCBI-ProteinID:
XP_057471517
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Position
22:18444061..18474489
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AA seq
695 aa
AA seq
DB search
MAQFWKPGTERPPLLDDEEGGILLYSASSASSGYGFVSIEKQRQRLPVFKYRTSILYLVE
THATTIIVGETGSGKTTQIPQYLKEAGWADGGRVIACTQPRRLAVQAVASRVAEEMGVKL
GEEVGYTIRFEDLTDRDLTRIKFLTDGVLLREMMDDPLLTKYSVIMVDEAHERSISTDIL
LGLLKKIQRRRPELRLVIASATIEAKSMAAFFHNSKKHRGLEGGDGVPKTEPAILSVEGR
GFNVQIFYVEEPVPDYIQAAVSTVMSIHDQEPMGDILVFLTGQDDIEAAVRLLTEEAXNN
GKPSSGLVVLPLYSGLSRAEQDLIFSPTPRGKRKVVISTNIAETSLTLEGVVYVVDSGFS
KQRFYNPISDIENLVVAPISKASARQRAGRAGRVRPGKCYRLYSEEHFVNEMSAEGIPEI
QRSNLVSCVIQLKALGIDNILGFDWPASPSPEAMIRALEVLYSLGVLDDDAKLTSPTGFQ
VAEIPLDPMISKMILASNQLGCSEEIITIAAILSIQSIWFSVRGQQKELDEAKLRFAAAE
GDHVTFLNVYKGFLQSGKSSKWCHKNFVNYHAMRKVIEIREQLRRIAQRIGIVVKSCDSD
MQVVRKAVTSGFFANACNLEAFSHSGMYKTVRSSQEVYIHPSSVLFRVNPKWVIYHSLVS
TDRQYMRNVISIDPSWLIEAAPHFYQHQRPNSISH
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattttggaaaccaggcacagagaggcctcccctcctcgacgatgaagaaggc
ggcattcttctctattctgcgtcttccgcctcgtctggatatggctttgttagcatagag
aaacaaaggcagagacttccagtgttcaagtaccgtacatccattctctatctggtggag
acccacgccactactatcattgttggtgaaacaggaagcggcaagaccacccaaattcct
cagtacctcaaagaagcaggttgggctgatggtggccgtgtgattgcttgcactcaacca
aggcgcttagctgtccaggcggtggcttctagggtggctgaagagatgggtgtcaagctt
ggggaagaagttggttataccattcgatttgaagatctcacggatagagacttaactagg
atcaaatttctcactgatggagtgttactgagggagatgatggatgaccctctcctgacc
aagtacagtgtcataatggttgatgaagctcatgagcggtctatttcaaccgatatctta
ttgggtctcttgaaaaagatccaacggcgtcgacctgaacttcgtcttgttatcgcgtct
gctacaattgaagctaaatcaatggcagctttttttcataacagcaaaaagcatcgagga
ctggaaggtggagatggtgtaccaaagacagagcccgccattctgtcagttgagggtaga
ggatttaatgtacaaatcttctatgttgaggagcctgttcctgactatatccaagctgct
gtttcaacagtaatgtcaattcatgatcaggaaccaatgggcgatatccttgtattccta
acaggtcaagatgatattgaagctgcagtccgcttgcttacagaagaagctncaaataat
ggaaagccttcttcaggattggttgttttgcctttatattcaggactttcacgtgcagag
caggacctaatattttcccctactcctagaggaaagaggaaagtagttatatcaacaaat
attgctgagacatcattgactttggagggtgttgtctatgttgtcgatagtgggttctca
aaacagcggttctataacccgatttcagatattgaaaatttggtagtagcaccgatatcc
aaggcatctgctagacaaagggctggtagagctggaagagtacgccctggaaagtgctac
aggctgtattcggaagagcattttgttaatgaaatgtcagcagaggggataccagagata
caaagatcaaatcttgtgtcttgtgtgattcagttaaaggccttaggcatagacaacatc
ttaggcttcgattggcctgcatctccatcacctgaagcaatgatcagagcacttgaagta
ctttattcactcggagtccttgatgacgatgccaaactaacttcaccgactggattccaa
gttgcagagataccattagaccccatgatctcaaaaatgatcttagcttcgaaccagctt
ggttgctccgaggaaatcatcactattgctgctattctttctatccagtctatctggttt
tctgttagggggcaacaaaaggagctggatgaagccaagctgagatttgctgctgctgag
ggtgatcatgtgaccttcctaaatgtttacaaagggtttcttcagtctggcaaatcttca
aaatggtgtcataagaactttgtaaactaccatgccatgcgaaaagttattgaaattaga
gaacaactcagaaggatagcacaacgaataggcatagttgtaaaatcttgtgacagtgat
atgcaggtcgtaagaaaggcagttacttctggattttttgcaaatgcttgtaatttagaa
gcgttcagccatagtgggatgtacaagactgttagaagttcccaagaagtttatattcac
ccgtcatctgtgttattcagagttaatccaaagtgggttatataccattctcttgtctcg
actgatcgccaatacatgcgcaatgtcatctctatagatccttcttggctcattgaggct
gctccacatttttaccagcaccagcggcccaattctatttctcattga
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