Actinidia eriantha (wild kiwifruit): 130760667
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Entry
130760667 CDS
T09464
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1A-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04120
Ubiquitin mediated proteolysis
aew04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130760667
04120 Ubiquitin mediated proteolysis
130760667
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130760667
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130760667
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130760667
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_11
Prok-RING_4
zf-RING_16
zf_RING_Vps8
zf-HC5HC2H
zf-RING-like
zf-C3HC4_4
zf-HC5HC2H_2
Motif
Other DBs
NCBI-GeneID:
130760667
NCBI-ProteinID:
XP_057472055
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Position
3:196187..204871
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AA seq
446 aa
AA seq
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MYFDFDGTLRQRLNAIQNNQNEIHTHPHKHKKRELQRRKMMSLGTYAGFSLVATLAVIYH
AFHTRGQFYPATVHLSTSKISLVLLLNMGLVIMCILWQLTKRVFLGSLREAEVERLNEQS
WREVVEILFAITIFRQDFSVTFLAMVTTLLLIKALHWLAQKRVDYIETTPSVPTLSHIRI
ISFMGFLLLLDSLFFYDSVKYLIQTRQASVSLFFSFEYMILATTIVSTFVKYVFYVSDML
MEGQWETKAVYTFYLELIRDLLHLSMYLCFFLVIFLKYGVPLHLIRELYETFRNFKVRVA
DYIRYRKITSNMNDRFPDATPEELNATCVICREEMTTAKRLSCGHLFHVHCLQSWLERQH
TCPTCRALVAPPENGANTSGPRADAPQQGTGTASSHSQSSAGDGVTNYTVSQHQARLKAA
ATAASIYERSFVYPSANTLGCITRGD
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgattttgatgggactcttcgtcagcggttgaatgcaattcagaataatcaa
aacgaaatccacacccacccacacaaacacaaaaaaagagagcttcaacggagaaaaatg
atgagtctggggacgtatgcagggtttagtttggtagccactctggcggttatttatcat
gcgtttcacactagaggacagttttacccagcaacagtacatttatcaacatccaagatc
agtttggtgcttcttctgaacatgggtcttgtcattatgtgtattttgtggcaactgacc
aaacgggtcttccttggatctctccgggaagcagaggttgaaaggctgaatgagcagtca
tggcgagaagtcgtggaaatactttttgcaatcaccattttccggcaagacttttcggtt
acatttctcgccatggttactactcttttgctaattaaggctctgcactggttggctcaa
aagagagttgactacatcgaaacaaccccatccgtccccacattgtctcacatccgaatc
atatcatttatgggatttctccttcttttggacagtctcttcttctacgactctgtgaag
tatttgatacaaacacgacaggcatccgtttctctcttcttttcgtttgagtatatgata
ctcgccaccacaatagtgtcgacgtttgtaaaatatgttttctatgtcagtgacatgctt
atggaaggacaatgggaaacaaaggcagtctacaccttttacttggaacttattcgggac
ttgctgcacttatcgatgtatttgtgcttctttcttgtgatttttttgaaatatggtgtg
cctctgcacttgattagggagctctacgagacatttcgcaactttaaggttcgagttgct
gattacattcgttatcggaagatcacttcaaatatgaatgatcgttttccagatgcaaca
cctgaagagctcaatgcaacctgcgtcatttgtcgtgaggagatgactacagccaaaaga
cttagttgtgggcatctgtttcatgtgcactgcctccagtcttggttagagagacagcac
acgtgtcctacttgcagggcacttgttgcaccacctgaaaatggggctaatacttctgga
ccacgggcagatgctcctcaacaaggaacaggaacagctagttcacattctcaaagttca
gctggggatggtgtaacaaattacactgttagccaacatcaggccagactcaaggctgct
gctactgctgcctcaatatacgagagatcttttgtttatccatccgcaaacacattaggg
tgtattaccagaggagactga
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