KEGG   Actinidia eriantha (wild kiwifruit): 130761340
Entry
130761340         CDS       T09464                                 
Name
(RefSeq) sm-like protein LSM2
  KO
K12621  U6 snRNA-associated Sm-like protein LSm2
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03018  RNA degradation
aew03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130761340
  09123 Folding, sorting and degradation
   03018 RNA degradation
    130761340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130761340
   03041 Spliceosome [BR:aew03041]
    130761340
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130761340
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     130761340
Spliceosome [BR:aew03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    130761340
 Complex C
  U2 snRNP components
    130761340
SSDB
Motif
Pfam: LSM SM-ATX DUF150_C DUF1256
Other DBs
NCBI-GeneID: 130761340
NCBI-ProteinID: XP_057472808
LinkDB
Position
23:1157855..1160674
AA seq 93 aa
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq 282 nt   +upstreamnt  +downstreamnt
atgttgttcttctcgtatttcaaggacctagtgggcagagaagtgactgttgagttaaag
aacgatctagccatccgaggcactctacattcggttgaccagtatctcaatattaagctt
gagaacactagggttgtggatcaagacaagtatccccacatgctctctgtaaggaactgc
ttcatcagaggatcagtggttcgatatgttcagttacctccggatggtgtcgacattgaa
ctgctgcatgatgccaccagaagagaagctcgtggagggtga

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