Actinidia eriantha (wild kiwifruit): 130761340
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Entry
130761340 CDS
T09464
Name
(RefSeq) sm-like protein LSM2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130761340
09123 Folding, sorting and degradation
03018 RNA degradation
130761340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130761340
03041 Spliceosome [BR:
aew03041
]
130761340
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130761340
mRNA degradation factors
5'-3' decay
Lsm complex
130761340
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
130761340
Complex C
U2 snRNP components
130761340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
DUF150_C
DUF1256
Motif
Other DBs
NCBI-GeneID:
130761340
NCBI-ProteinID:
XP_057472808
LinkDB
All DBs
Position
23:1157855..1160674
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AA seq
93 aa
AA seq
DB search
MLFFSYFKDLVGREVTVELKNDLAIRGTLHSVDQYLNIKLENTRVVDQDKYPHMLSVRNC
FIRGSVVRYVQLPPDGVDIELLHDATRREARGG
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgttgttcttctcgtatttcaaggacctagtgggcagagaagtgactgttgagttaaag
aacgatctagccatccgaggcactctacattcggttgaccagtatctcaatattaagctt
gagaacactagggttgtggatcaagacaagtatccccacatgctctctgtaaggaactgc
ttcatcagaggatcagtggttcgatatgttcagttacctccggatggtgtcgacattgaa
ctgctgcatgatgccaccagaagagaagctcgtggagggtga
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