Actinidia eriantha (wild kiwifruit): 130761367
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Entry
130761367 CDS
T09464
Name
(RefSeq) SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130761367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130761367
03036 Chromosome and associated proteins [BR:
aew03036
]
130761367
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130761367
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130761367
PBAF complex
130761367
GBAF(ncBAF) complex
130761367
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Motif
Other DBs
NCBI-GeneID:
130761367
NCBI-ProteinID:
XP_057472833
LinkDB
All DBs
Position
23:19904600..19906907
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AA seq
543 aa
AA seq
DB search
MSVNNNNPVKNITPFGNSGVTPQSMPVSQPTNLLSQSQPQTHGGSHFQGHFQLSEPQAQA
LAQAQYAQAHAQAQAQAAHAHFRSHLQSQNQSFAQLQNTGAGNVSSPSVLTPGTGSAKRP
PQKPPSRPSGSASANTGSPLKTMELTPAARRKKQKLPDKQIPDKVAAILPESALYTQLLE
FESRVDAALARKKIDIQESIKNPARVQKTLRIYVFNTFSNQTQTVPDKKNAEFPSWSLKI
IGRILEDGMDTNATGMVQKQNSLYPKFSAFFKKVTIYLEQNLYPDNHVILWESARSPVLH
EGFEVKRKGDKEFTAIIRLEMNYVPEKYKLSPALIDVLGIEVETRPRVMAALWHYVKIRK
LQIPSDPSYFMCDPPLRKLFGEDKMKFSMISQKISAHLTPPQPIHLEHKIQLSGNNPTGN
TCYDVLVDVPVSLQKEMSAFMANLEKHKEIDACDEAISAAIKKIHEHRRRRAFFLGFSQS
PAEFINALIASQSRDLKLVAGDASHNAERERRSDFYNHPWVEDAVIRYLNRKSTTGSEAP
GST
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgaataacaataacccagtgaagaatattaccccttttggaaattcaggggta
acaccacaatccatgcccgtgagtcagccaaccaatttgctatctcagtcacaaccacaa
acacacggtgggtctcactttcagggccattttcagctgtccgagcctcaagctcaagca
ttggctcaggcacagtatgcccaggctcacgcccaagctcaggcccaagcagcccacgca
cattttcgatctcatttgcaatcccaaaaccagtcctttgctcaattgcaaaataccggg
gctggtaatgtcagttcgccctcagttttgaccccaggcacgggaagtgccaagcggcct
cctcagaagccgccttctcggccttctggttcagccagtgccaacacgggctcacctttg
aaaactatggagctgacccctgctgctagaaggaagaagcagaagcttcccgataagcag
atcccggataaagtagcggcgattttgccggaatcggctctttatactcagcttcttgaa
tttgagtctcgggtcgatgctgcccttgcaaggaagaagattgatattcaagaatctatt
aaaaaccctgcccgcgttcagaaaacgcttcggatatatgttttcaacactttctcaaac
cagacacaaacagtccccgataagaagaatgctgagtttccttcttggtcccttaagata
attgggaggatcttggaagatggaatggatactaatgctactgggatggtgcagaaacag
aactctttgtatcctaaattctcagcttttttcaagaaagtaaccatttatttagaacaa
aatctctatccagacaaccatgtaattttgtgggaaagtgcccggtcgcctgtgcttcat
gagggctttgaggtaaaaagaaaaggggataaggaatttactgcaattataagactggaa
atgaattatgtgcctgagaaatacaaactttcaccggccttgatagatgttcttggaatt
gaggtagaaacccgaccaagggttatggctgcactttggcattatgtgaaaattcggaag
ttgcagattccgagtgatccttcgtacttcatgtgtgatccccctcttcggaaattattt
ggggaagacaagatgaaattttccatgatttcgcaaaagatctcggcacatttaaccccg
ccacaacctattcatttggagcataagatccagctttccgggaataatccaactgggaat
acttgttacgatgtgctggttgatgttccagtgtcattacagaaggaaatgtctgctttc
atggcaaatttggagaagcacaaggagattgatgcttgtgatgaagctatttctgctgct
ataaagaagatccacgaacatcgtcggaggcgggctttctttctagggttcagtcagtct
cctgcggaatttatcaatgctctgattgcttctcagagcagggatctgaagcttgttgcg
ggagatgctagtcataatgcagagagagagcgccggtctgacttctacaatcatccgtgg
gttgaagacgccgtaattcgttatctgaaccgcaaatctactactggaagtgaagctcct
ggaagcacgtag
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