Actinidia eriantha (wild kiwifruit): 130761659
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Entry
130761659 CDS
T09464
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 15-like
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03015
mRNA surveillance pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130761659
09122 Translation
03013 Nucleocytoplasmic transport
130761659
03015 mRNA surveillance pathway
130761659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130761659
03041 Spliceosome [BR:
aew03041
]
130761659
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130761659
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130761659
Spliceosome [BR:
aew03041
]
Complex C
Other components
EJC/TREX
130761659
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130761659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CMS1
YihI
Motif
Other DBs
NCBI-GeneID:
130761659
NCBI-ProteinID:
XP_057473177
LinkDB
All DBs
Position
23:20993751..21003090
Genome browser
AA seq
428 aa
AA seq
DB search
MGEVRDNEAYEEELLDYEEEDEKAPDSVNGKASIEAPKKGYVGIHSSGFRDFLLKPELLR
AIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIEPVAGQVAALV
LCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKVHKDLLKNECPHVVVGTPGRILA
LGRDKDLGLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSATLSKEIRPV
CKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLSELEKNRKLNDLLDALDFNQVVIFVKSVS
RAAELNKLLVECNFPSICIHSGMSQEERLTRYKGFKEGHKRILVATDLVGRGIDIERVNI
VINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSSASDSDVLNQVQERFEVDIKELPEQI
DTSTYMPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaggtgagagacaacgaggcctacgaggaagagcttctggactacgaggaggaa
gacgaaaaagcccccgactccgtcaacggcaaagcctccatcgaagcccccaagaagggc
tatgttggaatccacagctcggggttcagagatttcctgttgaaaccagagcttctccga
gcaattgtagattcaggatttgagcatccttcagaagtgcaacatgagtgtatacctcaa
gctatcttaggaatggatgtcatctgtcaagcaaagtcaggaatggggaaaactgcggtg
tttgttctctctactctgcagcagattgaacctgttgcaggacaagttgccgctcttgtc
ctctgtcatacaagggaattggcttaccagatctgccatgaatttgagaggttcagtacc
tatttacctgatattaaggttgctgtcttctatggaggagtcaatatcaaggttcacaag
gatttgctgaagaatgagtgccctcatgttgttgttggaactcctggtagaatattggct
cttggaagagataaggaccttggcttaaagaatgtgaggcattttatccttgatgagtgt
gacaagatgcttgaatcacttgacatgaggagagatgtgcaggaaatttttaagatgacc
cctcatgataaacaagttatgatgttctcagctacactcagcaaagagattcgccctgtt
tgcaagaagtttatgcaagatccaatggaaatttatgtggacgatgaggccaaattgact
cttcatggtcttgtccagcattacattaaattgagtgagcttgagaaaaaccgcaagctt
aatgacctccttgatgcactggacttcaatcaagttgtcatttttgtcaaaagtgtcagc
agagcagctgagctgaacaagttacttgtggagtgcaacttcccttctatctgcatccat
tctggaatgtcccaggaagaaaggttgacgcgttacaaaggtttcaaggaggggcataaa
agaattcttgtggccactgatttagtaggaagaggaattgacattgagcgagtcaacatt
gttatcaactatgacatgcccgattctgctgacacctatctgcaccgcgtcggcagagct
ggtaggtttggtaccaaagggcttgcgataacgttcgtctcttctgcatccgattctgat
gttctcaatcaggttcaggaaaggtttgaggtggatattaaggaacttcctgagcaaatt
gatacttctacatacatgccatcgtga
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