Actinidia eriantha (wild kiwifruit): 130762063
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Entry
130762063 CDS
T09464
Name
(RefSeq) pre-mRNA-processing-splicing factor 8A-like
KO
K12856
pre-mRNA-processing factor 8
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130762063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130762063
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
130762063
Complex C
U5 SnRNP specific factors
130762063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
130762063
NCBI-ProteinID:
XP_057473674
LinkDB
All DBs
Position
23:20887055..20900308
Genome browser
AA seq
2349 aa
AA seq
DB search
MWNNGGQIAPPGTGGSSIPPPPAAQPSYTVLPSPAEVEARLEEKARKWMQLNANRYRDKR
KFGFVETQKEDMPQEHVRKIIKDHGDMSSKKFRHDKRVYLGALKFVPHAVYKLLENMPMP
WEQVRDVKILYHITGAITFVNEIPWVVEPIYLAQWGTMWIMMRREKRDRRHFKRMRFPPF
DDEEPPLDYADNLLDVDPLEPIQLEMDEEEDSAVCTWFYDHKPLVKTKLINGPSYRKWHL
SLPIMATLHRLAGQLLSDLIDRNYFYLFDMESFFTAKALNMCIPGGPKFEPLYRDMEKGD
EDWNEFNDINKLIIRSPLRTEYRIAFPHLYNNRPRKVKLSIYHTPMIMYIKTEDPDLPAF
YYDPLIHPITSTSKDRREKKTYEEDDEDDDFYLPEGVEPLLKDTPIYTDTTAAGISLLFA
PRPFNMRSGRMRRAEDIPLVSEWFKEHCPPSYPVKVRVSYQKLLKCFVLNELHHRPPKAQ
KKKHLFRSLAATKFFQTTELDWAEAGLQVCKQGYNMLNLLIHRKNLNYLHLDYNFNLKPV
KTLTTKERKKSRFGNAFHLCREILRLTKLVVDANIQFRLGNVDAFQLADGLQYTFSHVGQ
LTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPMWRVWLFFLRGIVPL
LERWLGNLLARQFEGRHSKGVAKTVTKQRVESHFDLELRAAVMHDVLDAMPEGIKQNKAR
TILQHLSEAWRCWKANIPWKVPGLPVPIENMILRYVKSKADWWTNVAHYNRERIRRGATV
DKTVCRKNLGRLTRLWLKAEQERQHNYLKDGPYVTPEEAVAIYTTTVHWLESRKFSPIPF
PPLSYKHDTKLLILALERLKESYSVAVRLNQLQREELGLIEQAYDNPHEALSRIKRHLLT
QRAFKEVGIEFMDLYSYLIPVYEIEPLEKITDAYLDQYLWYEGDKRHLFPNWIKPADSEP
PPLLVYKWCQGINNLQGIWDTSEGQCVVMLQTKFEKFFEKIDLTMLNRLLRLVLDHNIAD
YVTAKNNVVLSYKDMSHTNSYGLIRGLQFASFVVQYYGLVLDLLLLGLTRASEIAGPPQM
PNEFITYWDTKVETRHPIRLYSRYIDKVHILFRFTHEEARDLIQRYLTEHPDPNNENMVG
YNNKKCWPRDARMRLMKHDVNLGRSVFWDMKNRLPRSITTLEWENSFVSVYSKDNPNLLF
SMSGFEVRILPKIRMTQEAFSNTRDGVWNLQNEQTKERTAVAFLRVDDEHMKVFENRVRQ
ILMSSGSTTFTKIVNKWNTALIGLMTYFREATVHTQELLDLLVKCENKIQTRIKIGLNSK
MPSRFPPVIFYTPKEIGGLGMLSMGHILIPQSDLRYSQQTDVGVTHFRSGMSHEEDQLIP
NLYRYIQPWESEFVDSQRVWAEYALKRQEAQSQNRRLTLEDLEDSWDRGIPRINTLFQKD
RHTLAYDKGWRVRTDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDVIQALGGVEGILE
HTLFKGTYFPTWEGLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRAN
VYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVLDQELDALEI
ETVQKETIHPRKSYKMNSSCADVLLFAAHRWPMSKPSLVAESKDVFDQKASNKYWIDVQL
RWGDYDSHDIERYTRAKFMDYTTDNMSIYPSPTGVMIGLDLAYNLHSAFGNWFPGSKPLL
AQAMNKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGEIFSNQIIWFVDDTNVY
RVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKVIHTSVWAGQKRLGQLAKWKTAEEVA
ALVRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKIEKFGDLI
LKATEPQMVLFNIYDDWLKTISSYTAFSRLILILRALHVNNEKAKMLLKPDKTIITEPHH
IWPSLTDDQWMKVEVALRDLILSDYAKKNNVNTSALTQSEIRDIILGAEITPPSQQRQQI
AEIEKQAKEASQLTAVTTRTTNVHGDELIVTTTSPYEQAAFGSKTDWRVRAISATNLYLR
VNHIYVNSEDIKETGYTYIMPKNILKKFICIADLRTQISGYLYGVSPPDNPQVKEIRCIA
MPPQWGTHQQVHLPSALPEHDFLNDLEPLGWMHTQPNELPQLSPQDLTSHARILENNKQW
DGERCIILTCSFTPGSCSLTAYKLTPTGYEWGRANKDTGSNPHGYLPTHYEKVQMLLSDR
FLGFYMIPDTGPWNYNFMGVKHTVSMKYGIKLGTPREYYHEDHRPTHYLEFSNLEEGETA
EADREDTFT
NT seq
7050 nt
NT seq
+upstream
nt +downstream
nt
atgtggaacaacggcggccagattgcgccgccgggcaccggcggctcgtcgatacctccg
cctccggcggcgcagccgtcttacaccgtccttccttcgccggcggaggtggaggctcgt
ttggaagaaaaagcgaggaagtggatgcagctgaatgcgaatcgttatcgcgacaagcgc
aagtttggattcgtcgagactcagaaggaggacatgcctcaggaacacgttagaaaaatc
atcaaggaccatggtgatatgtcgtcaaaaaaattccgtcacgataaacgtgtttatctc
ggagcccttaaatttgttccccatgcagtttacaagctcctggagaacatgccaatgcct
tgggaacaggtccgtgatgtgaaaattttgtaccatattactggtgctatcacatttgtg
aatgaaatcccatgggtggttgagcccatttatttagctcagtggggtacaatgtggatc
atgatgcggagagagaagagggatcgtcgacattttaaaagaatgcgatttccccctttt
gacgatgaggagcctccactggactatgctgataatcttttagatgtagatcctttggag
cctatccaattagaaatggacgaggaagaagattcagctgtatgtacttggttttatgac
cataaacctctggtaaaaacaaaacttatcaatggtccgagttaccggaaatggcatctc
tcccttcccatcatggcaacgcttcatcggctggcagggcaactgctttctgatttgata
gaccgcaattatttttacttgtttgacatggagtcattttttactgccaaagctctgaac
atgtgcatacctggtggtcctaagtttgagcctttgtatcgtgacatggagaaaggtgat
gaagattggaatgagttcaatgacatcaacaaacttataattcggtctcctctcagaaca
gagtatagaattgcatttcctcatctttataacaataggcccaggaaagtgaagctcagt
atatatcacaccccaatgattatgtacataaaaactgaggatcctgatctgcctgcattt
tattatgatcctctaatacaccccataacctccactagtaaagaccggcgcgagaagaaa
acttatgaagaggatgatgaggatgatgatttttatttgcctgagggggtggaacctctg
ctaaaagacactccaatttataccgacactacagctgctggtatttcactactgtttgct
ccacgaccttttaacatgagatctggtcggatgcgacgagctgaagatatacctctcgtg
tccgagtggttcaaggagcactgtcctccatcatacccagttaaagttcgggtcagctac
cagaaattgttgaaatgttttgtgttgaatgagctacatcacagaccacccaaggctcaa
aagaagaagcacttgttccgctctcttgcagctacaaagttttttcaaaccacagaactg
gattgggctgaggcaggtcttcaagtttgtaaacaagggtataacatgcttaatctgctg
atacacaggaaaaatttgaattatctccaccttgattataacttcaacctgaagcctgta
aagactcttactaccaaggaacgtaagaagtcaaggtttggtaatgccttccatctgtgc
cgagaaatattgcgtttgacaaagcttgtagttgatgccaatatacagttccgcttggga
aatgtagatgcatttcaattggcagatggcttgcaatatactttctcccatgttggccag
ttgacaggcatgtaccgttacaagtacaggctcatgcggcagattcgaatgtgcaaagat
ttgaagcacttgatttactaccgattcaatactgggcctgtggggaaaggacctgggtgt
ggattctgggctcctatgtggagggtgtggctgttcttccttaggggaattgtacctctg
ctggaaaggtggttgggaaatttacttgcaaggcaatttgaggggcgacattcaaaagga
gtggccaagactgttaccaagcaacgtgttgaaagccacttcgaccttgagcttcgtgct
gctgttatgcatgatgttcttgatgccatgccagagggcattaagcaaaataaggcaaga
accatcttgcagcatctaagtgaagcatggcgctgttggaaagcaaacatcccttggaag
gttcctgggttgcccgttccgattgagaacatgattcttcggtatgtcaagtcaaaagct
gattggtggacaaatgtggctcattataatcgtgaacgtataaggagaggtgcaacagtt
gacaagacagtttgccgcaagaatctgggaagattgactcgcctttggctgaaggcagaa
caggaacgccagcacaattatctgaaagatggtccatatgtgacaccagaagaagctgtg
gctatttacacgactactgtgcattggttggaatcacggaaattctctcctattccattc
cctccgctgtcttacaaacatgacacaaagcttcttatcttagctcttgagaggttgaaa
gaatcgtatagtgtagctgtgagattaaatcaactacaaagagaagagttaggtctcatt
gaacaagcttatgataatccacatgaagccttgtcgaggataaagcgtcacctgcttacg
cagcgtgccttcaaagaagttggcattgagttcatggatttgtacagctatctgattcca
gtttacgagattgaacctcttgagaaaattactgatgcatatcttgaccaatacctttgg
tatgaaggtgacaaacgccatctcttccctaattggataaagccggcagattcagagcca
ccaccattactggtctataaatggtgtcaggggataaacaatttacaaggaatctgggac
acaagtgagggccagtgtgtggtgatgcttcagaccaagtttgagaaattctttgaaaaa
attgacttgaccatgttgaataggcttctgcgcctggtccttgatcacaacattgctgat
tatgtcactgcaaagaacaatgttgtgttatcgtacaaggatatgagtcacacgaactca
tatgggcttatacgtggacttcagtttgcttcttttgtcgtacagtattatgggcttgtg
ctagatctcttgcttcttggtttgacccgagccagtgaaattgctggtcctccgcaaatg
ccaaacgagttcattacgtattgggacaccaaggttgaaactcgacatccaattcgcctg
tactcccggtatattgacaaagtgcatatattgttccgcttcacccatgaagaagcgcgg
gacctcatccaacgatatctcactgaacatcctgatcctaacaatgaaaatatggttggt
tacaacaataagaagtgttggccaagggacgctagaatgagactaatgaaacatgatgtc
aatcttgggagaagtgttttctgggatatgaagaaccgtcttccacgaagtatcactaca
ttggaatgggagaacagctttgtttctgtttacagcaaagacaacccgaacctgcttttt
agcatgtctggttttgaagttcgtatactgcccaagataagaatgactcaagaggcattc
agtaatacaagagatggggtttggaacctgcagaatgaacaaactaaagaacggactgca
gttgctttcttgcgggttgatgatgaacacatgaaggtgtttgagaatcgtgtgaggcaa
attcttatgtcttcaggttcaacaacattcacaaaaattgtcaacaaatggaatactgcg
cttataggcctcatgacttattttcgtgaagccactgtgcatacacaagaactgttagat
ttgctggtgaaatgtgaaaacaaaatacaaacccgtattaagatcggactgaactcaaaa
atgcctagcaggttcccccctgtcattttttatactccgaaggaaattggtgggcttggc
atgttatcaatgggtcacatattgatccctcagagtgatcttcgttacagtcagcagaca
gatgttggtgtaactcattttaggagtggaatgagtcatgaagaggaccagctgattcca
aatctttatcgttacattcagccatgggagagtgagttcgttgattctcagcgagtatgg
gcagaatatgcactgaagaggcaggaagctcaatcccaaaataggcgtttaactcttgaa
gatttggaagattcttgggatcgtggaatacctcgaatcaatactttgtttcagaaggac
cggcacacccttgcatatgacaaaggatggagagttcgtacagattttaaacaatatcaa
gttttgaaacaaaatccattttggtggacgcaccaaagacatgatggaaaattatggaat
ttgaataactatcgtacggatgtcatccaagcacttggaggggttgaaggaattcttgag
catacattattcaagggaacttacttccctacttgggagggtctcttttgggagaaggct
tccggttttgaggagtccatgaagtataagaagctgactaatgcacagagatctgggctt
aatcaaatccctaaccgtaggtttaccctgtggtggtcacctacaataaatcgagccaat
gtgtatgttggtttccaagtgcagctagatttgactggaatatttatgcatggaaagata
cctactttgaagatatcactcattcagatattccgcgctcatctgtggcagaagattcat
gagagtgttgtcatggatctgtgccaggtgttagatcaagagttggatgcactggaaata
gaaactgttcagaaggaaaccatccatccaaggaagagttataaaatgaacagctcttgt
gccgacgttcttctatttgctgctcatagatggcccatgtcgaagcctagtctagtggcg
gaatcaaaggatgtgtttgatcaaaaagcaagcaataaatactggatagatgtacagctc
cgttggggagattatgactctcatgatatcgagcggtatactcgggcaaagtttatggac
tacactactgacaatatgtctatctatccatcgccaactggggtaatgattggacttgat
cttgcatataacttgcattctgcatttggaaactggtttcctggttcaaagccactgctt
gcacaggccatgaataagatcatgaagtcaaatccagctttatatgttttgagggagcgg
ataaggaaagggttgcagttgtattcttctgagcctacagagccatacttgtcatctcag
aactatggagagatattcagcaatcagataatatggtttgtcgatgacacaaatgtatat
cgtgtcacaattcataagacatttgaaggaaatctcactacaaaaccaattaatggtgcc
atcttcatattcaatccaaggacggggcagctgtttcttaaggtcattcacacaagtgtc
tgggcgggccaaaagcgtctgggtcagctggccaagtggaagacagccgaagaagtggct
gctcttgtgcggtccttgcctgttgaagaacagccaaagcaaattattgtgacccgtaaa
ggaatgctcgatcctttagaggttcacttgctggacttcccgaatatagtaatcaaagga
agcgagctgcaacttccattccaagcttgcttgaagatagagaaatttggtgatctcatt
ctgaaggcgaccgagccacagatggtcttattcaacatatatgatgattggttgaaaact
atttcatcctacacagcattctcgagacttattttgattctgcgtgctcttcatgtgaac
aatgagaaagcaaagatgttactaaagcctgataagacaattatcactgagccccatcac
atttggccttctcttacggatgaccagtggatgaaggttgaggttgctttgagagatctt
atactctccgactatgccaaaaagaacaatgtgaacacatcagcattgacacaatctgag
attcgtgacataatacttggagctgagataactccaccctcacagcaacgtcaacaaatt
gcagagatcgagaaacaggcaaaagaagcaagtcaattgacagcagtgactacaaggacc
acaaatgttcacggtgatgaactcattgtcactaccacaagtccctacgaacaagctgca
tttggttctaaaactgattggcgtgtcagagcaatttcagccacaaatctttatctgcga
gtaaatcatatatatgtgaattcagaggatataaaggaaacgggctacacatacatcatg
cccaagaacattttgaagaaattcatatgcattgcagatctgcggactcaaatttcaggg
tacttgtatggcgtaagtcctccggacaatcctcaggttaaggaaattcgatgtatcgcg
atgccaccgcaatggggtactcatcagcaagtgcatctcccatcagctcttcccgagcac
gatttcctaaatgatttggagcctctgggatggatgcacactcaaccaaatgagcttcct
caattgtcaccgcaggatctcacttcccatgctcggatcctagagaataacaagcaatgg
gatggggagaggtgtattatcctgacttgcagttttacgccgggctcctgttcattaact
gcgtataagcttacgcccaccgggtacgaatggggacgggccaacaaagacactggaagc
aatcctcatggctatttgccaacacattacgagaaggtccagatgctcctgagtgaccgc
ttcctaggtttctacatgattccagatactggcccatggaattacaacttcatgggggtg
aagcatacggtgagcatgaaatatgggatcaagctggggacacctcgggaatactatcac
gaggaccacagaccgactcactacttggagttcagcaacttggaggagggcgagactgcg
gaagcagacagggaagatacattcacataa
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integrated database retrieval system
