Actinidia eriantha (wild kiwifruit): 130762700
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Entry
130762700 CDS
T09464
Name
(RefSeq) DNA mismatch repair protein MSH6-like
KO
K08737
DNA mismatch repair protein MSH6
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
130762700
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aew03400
]
130762700
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
130762700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
PTM_DIR17_Tudor
Tudor_KDM3B
nSTAND_NTPase5
Prenyltrans
Motif
Other DBs
NCBI-GeneID:
130762700
NCBI-ProteinID:
XP_057474469
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Position
23:213777..224799
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AA seq
1294 aa
AA seq
DB search
MDPSRRLSNGRSPLVNQQKQITSFFTKSSSSPSPSNLPSKQNPKSQPNPIPKLSPSPSPI
TPSPLQSKHRKPLLVIGSSPISPSTPSTTKKSHGQEAVNKRVRVYWPLDQSWYEGCVKSF
DKISGKHLVQYDDAEEELLDLSKEKIELVEEEVKRRFRRLRRVSVIEDEGEEEFVANVES
GGDDESADEDWGKNVETEEAGDGEEGMDLEEEDEDDKDRKQGKDSESKKRKISGEGNSGY
SKKRKSDGDAKMSIFKASLDGNGDKVVETKVNGSGKAAHAVDDGLVGDAAERFGMRERQK
LHFLGENRRDANRRRPGDFNYDPRTLYLPPDFLKSLTGGQRQWWEFKAKHMDKVLFFKMG
KFYELFEMDAHVGVKELDLQYMKGEQPHGGFPEKNFSMNVEKLARKGYRVLVVEQTETPE
QLELRRKEKGSKDKVVKREICAVVTKGTLTEGEMMSANPEASYLLAVTESCQTLGNQQGR
IFGICVVDVATNKVILGQFQDDQECSALCCLLSELRPVEIVKPAKLLSPETERILLTHTR
CPLVNELVPLSEFWDAEKTVSEVKAVYRRFHEQSISLSTNEANLLATGSSSEEASSSLPD
VLLEFVNAGNDGSYALSALGGTLFYLKQAFLDETLLRFAKFEPLPCSGFSDIGQKPYMVL
DAAALENLEIFENSRNGDSSGTLYAQLDHCVTAFGKRLLKSWLARPLYHLDSIRERQDAV
GDLKGVNLPFALEFRKDLSRLPDMERLLARIFASSEANGRNANKVVLYEDASKKQLQEFI
SALRGCELMTQACSALGVILESVESRLLHHLLTPGKGLSDVHSVLKHFKDAFDWVEANNS
GRILPHDGVDMEYDSACRAVMEVESGLKKHLKEQRKLLGDATINYVTIGKDAYLLEVPES
LSGSVPQNYELRSSKKGFFRYWTPNIKKLIGELSQAESEKESKLKSILQRLVGRFGEHHN
KWRQLVSTVAELDVLISLAIASDYYEGPTCRPIISGLPCPDEVPFLCAKSLGHPVLRSDS
MGKNTFVPNDVTIGGSGHANFILLTGPNMGGKSTLLRQVCLATILAQVGADVPAECFEMS
PVDRIFVRMGAKDHIMAGQSTFLTELLETASMLSSATHNSLVALDELGRGTSTSDGQAIA
ESVLEHFVHNVQCRGMFSTHYHRLAVDYQQDPKVSLSHMACKVGKGVGDLEEVTFLYRLT
PGACPKSYGVNVARLAGLPDTVLHKATAKSQEFEGMYGKHRKLPIQIAEDKMRALIRHLI
EIVTNLNCHETAERIDVRSLSELQNTARMLLKQN
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atggacccttcccgtcgactgagcaacggacgatccccgttggtgaatcaacaaaagcaa
atcacatctttcttcaccaaatcctcttcttctccttccccatcgaatcttccctccaaa
caaaaccctaaatcccaacctaaccccatccccaaactgagccctagccctagtccaatc
actccttcacctctccaatccaaacacagaaagcctcttctagtcatcggatcatctccg
atttccccgtcaacgccaagcaccaccaagaaatcgcacggccaggaggcggtgaacaag
agggttagggtttattggccgctcgatcaatcttggtacgagggttgcgtgaaatcgttc
gataaaatatcaggtaagcatctggttcagtacgacgatgccgaggaagagcttttggat
ctttcaaaggaaaagatcgagttggtcgaggaagaagtgaaaagaaggttccggaggctg
cgtcgtgtttcggtgattgaagatgaaggagaagaagaatttgtggcgaatgtagagagt
ggtggggatgatgaatcggcggatgaagattgggggaagaacgtggaaacagaagaagct
ggagatggcgaggaggggatggatttggaggaggaagatgaggatgataaggatcgaaag
caggggaaggattcggaatcaaaaaagcgaaagataagtggagaagggaattcaggttat
agtaagaagaggaagagtgatggagatgccaagatgagcatatttaaggcttctttagat
ggcaatggagacaaagtggtggagacaaaagtaaatggcagtggaaaagcagctcatgcc
gtagatgatggtctagtgggtgatgccgcagaaaggtttggcatgcgtgaaagacagaag
ttgcacttccttggggaaaaccgtagggatgctaatagaagacgtcccggagattttaat
tatgatccaaggactctctacttgcctcctgattttttaaagagcttaactggtggccag
agacaatggtgggagtttaaggcaaagcatatggataaggttctatttttcaagatgggc
aagttttatgaacttttcgaaatggatgcacatgtaggagtgaaagaacttgatttgcaa
tatatgaagggagaacagcctcatggtggatttccagaaaagaatttctcaatgaatgta
gagaaattggcaaggaagggttatcgggttcttgttgtggagcagacggagacgcctgaa
cagcttgagcttcgtcgcaaggaaaagggttctaaagacaaggttgtgaagcgagaaata
tgtgctgtggtcacaaaagggacgttaactgagggagagatgatgtcagcaaaccccgag
gcttcttacttgttggcagtgactgaaagctgtcaaactttaggaaaccaacaggggcga
atctttggtatctgtgtggttgatgttgctacaaacaaggtcattcttggtcagtttcag
gatgatcaagagtgcagtgccttgtgttgtctgctatctgaattgaggccggtggaaatt
gtaaaacctgctaagctgcttagccctgaaactgagagaattctacttacacatacaaga
tgtcctttagttaatgagttggttccactttcagaattctgggatgctgagaaaactgtt
agtgaagtcaaggctgtctacaggcgttttcatgagcaatcaatatctttgtctacaaat
gaagcaaatttgcttgctactgggtcctcttcagaagaagcctccagctccctaccagac
gtattgttggagtttgtgaatgcaggcaatgatggcagctatgcactttctgcacttggc
ggcactcttttctacctgaagcaagcttttctggatgaaactttactcagatttgcaaag
tttgagccgcttccatgctctggtttcagtgatattggtcaaaagccatacatggtgctt
gatgctgctgcgctggagaaccttgagatatttgagaatagtagaaatggagactcttcg
ggaacactatatgcgcaattggaccattgtgtgacagcatttggaaagaggttactcaaa
tcatggcttgcacggcctttgtaccatctggattcaattagagaacggcaggatgctgtt
ggagacctcaagggggttaacctaccttttgcacttgaatttcggaaagacttgtccagg
cttccagatatggagcggttgctggctcgtatctttgccagcagtgaagctaatggaagg
aatgcaaataaagtagttctatatgaggatgcgtcaaagaaacaacttcaagagttcata
tcggctttacgcggttgtgaattaatgacccaagcgtgctctgcacttggtgtcatcttg
gaaagtgttgaatctaggctcttacatcatttgttaactcctggtaaaggcctttctgat
gttcattcagttctaaagcatttcaaggatgcctttgattgggtggaagcaaataattca
ggtcgtatactacctcatgatggggttgatatggagtatgattctgcatgcagagcagtt
atggaggtggagtctggtttgaaaaaacacttgaaggaacagcgaaagttacttggagat
gcaacaataaattacgtaaccattggaaaggatgcgtaccttctggaagtccctgaaagt
ttgagtgggagtgttccccaaaattatgagttacgatcatccaaaaagggcttctttcgt
tactggactccaaatattaagaagttaataggagagctctcgcaagctgaatctgaaaag
gagtctaagttgaaaagcattttacagaggttggttgggcgtttcggtgagcatcataat
aagtggagacaactagtttctacagttgcagaactggatgttttgattagcttagcaatt
gcaagtgactattatgaaggacccacatgccggcccattatctcagggttgccatgtcca
gatgaagtgcctttcctatgtgctaaaagtttgggtcatcctgttcttagaagtgattct
atgggcaagaacacatttgtccctaatgatgttactattggtggttctggtcatgcaaac
ttcatcctgctcactggtcctaatatgggagggaagtccactcttcttcgccaagtttgc
ttggctacaattttggcccaggtaggagcagatgtccctgcagaatgttttgaaatgtca
cctgttgacagaatctttgttaggatgggagcaaaagatcatattatggcaggccaaagc
acatttctgacagagcttttagagactgcatctatgctctcatcggcgacccacaattca
cttgtggcattggatgaacttggacgtgggacatcaacttcagatgggcaagctatcgcg
gaatcagtactcgaacattttgtccacaacgtgcagtgtcgaggaatgttttctactcac
tatcatcgattagctgttgactatcagcaggaccccaaagtctcactttctcatatggca
tgcaaagttggaaaaggagttggagatctggaggaagttacctttctttacaggttgaca
cctggtgcatgccctaaaagctatggtgtaaatgttgcacggttagctggacttcccgac
actgtacttcacaaagctactgccaagtctcaagagtttgaaggaatgtatggcaagcac
aggaagttgcctattcaaattgcggaagacaaaatgagagctcttatccgacatttaatt
gaaatagtgacgaatttgaattgccacgagactgctgagagaatagatgtcaggtcacta
tctgaactgcagaatacagcaaggatgcttctgaaacaaaactag
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