Actinidia eriantha (wild kiwifruit): 130763381
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Entry
130763381 CDS
T09464
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42-like
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130763381
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130763381
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130763381
Spliceosome [BR:
aew03041
]
Complex A
U2 snRNP components
U2 related factors
130763381
Complex B
130763381
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
130763381
NCBI-ProteinID:
XP_057475276
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All DBs
Position
24:complement(9235210..9244710)
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AA seq
1152 aa
AA seq
DB search
MEESRHKSLRREGSESKEELKKNHRKEREDRDGHGERRRDRDRDRDWYRESSDKKREKES
RLSEREKSFDEEKYRENEREKHKDREMDKDGERDRGRMRSGDDEKPRERERAKEKDRDRE
ERVEAEREREREDIKREKDRKKEKRERERERERAREEREREERHRERIREREKRRYDSCD
EDDDIKDRDRKRWRREDDNKERERERSSRSRKHREDSDDSSSRRRSEEDLLEKKEARTRE
EDLEDEQQKLDEEMEKRRRRVQEWQELKRKKEESERESLGVTADAEEPKSGKTWTLEGES
DDEESAVEEKTEMDMNLDGDAKPSVEVGNDMVESGDTAPGLQNGGNDDMEDEEIDPLDAF
MNSMILPEVKELENSVVSLAPNKIDSDLKNDKNDKRSNGEQPRKGSSKSMGRIIPDEDSD
SDYGDIANDEDPLEDEDDNEFMKRVKKTKVEKLSIVDHSKIHYPPFRKDFYIEVKEISRM
TSEEVAVYRRQLELKLHGKDVPRPVKTWHQTGLSTKILDTIKKLNFEKPMPIQAQALPII
MSGRDCIGIAKTGSGKTLAFVLPMLRHIKDQPPLTPGDGPIGLIMAPTRELVQQIHADIK
KFAKVTGITCVPVYGGSGVAQQISELKRGAEIVVCTPGRMIDILCTSGGKITNLRRITYM
VMDEADRMFDMGFEPQITRIVQNTQPDRQTVLFSATFPRQVEILARKVLNKPVEIQVGGR
SVVNKDITQLVEVRPESDRFFRLLELLGEWYEKGKILIFVHSQEKCDALFRDLLKHGYPC
LSLHGAKDQTDRESTISDFKSNVCNLLVATSIAARGLDVKELELVVNFDVPNHYEDYVHR
VGRTGRAGRKGCAITFISEDDARYAPDLVKALELSEQVVPDDLKTLADGFMAKVNQGLEQ
AHGTGYGGSGFKFNEEEDEVRRAAKKAQAKEYGFEEDKSDSEDEDEGVRKAGGDLSQQAI
LAQAAALAAASKVSMGTMSAPVSAAQLLPNGGLPLSLPGVLGLTIPGAAAVVPGAPLSIT
AGDGAARAAALAAAMNLQHNLAKIQADAMPEHYEAELEINEFPQNARWKVTHKETLGPIS
EWTGAAITTRGQYFPPGKVPGPGERKLYLFIEGPTEQSVKRAKAELKRVLEDITTQASLL
PGSAQPGRYSVL
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcgaggcacaagtctttgcggagggaaggttccgagagcaaggaagaattg
aagaaaaatcatcgaaaggaaagggaagatcgagatgggcatggagagaggcgcagggac
agggacagggacagggattggtatcgtgaatcttctgataagaagagagagaaggagagt
aggctgtcggagagggagaagagctttgatgaagagaagtaccgggaaaatgagagggag
aagcacaaggatagagagatggacaaggacggtgagagggataggggaaggatgaggagt
ggggatgatgaaaaaccgcgggagagagagagggcaaaagaaaaggacagggacagggaa
gaacgagttgaggccgaaagagaaagagaaagagaagatataaagagggagaaggatagg
aagaaggagaagagagagagggagagggagagggagagggcaagagaggagcgggagagg
gaggagaggcatagagagaggattcgggagagggagaagcgtcgatatgatagctgtgat
gaagatgatgacattaaagatcgtgatagaaagaggtggaggagagaggatgataacaag
gaaagagagcgtgaacggagcagcaggtcaaggaagcatagggaggacagtgatgatagt
agttccaggagaaggagtgaagaagatttgttggagaagaaagaggcaagaacccgagaa
gaggatttggaagatgaacaacagaaattggatgaggagatggaaaagcggaggaggaga
gttcaggaatggcaagagctgaaaagaaagaaggaggaatctgagagagaaagccttgga
gtaacagcggacgctgaagaacctaaatctggaaagacctggacgctagaaggagaatct
gatgacgaagaatctgctgttgaggagaaaacagaaatggatatgaacttggatggagat
gccaagccttcggttgaggttggcaatgacatggttgaaagcggagacactgcacctgga
ctgcaaaatggtggtaatgatgatatggaggatgaggaaattgatccgttagatgctttc
atgaattctatgatattgccggaagttaaggagctggaaaattctgtagtatctcttgcc
cctaacaagatagattctgacttgaagaatgataagaatgacaagcgaagtaacggagaa
cagcccagaaaaggttcgagtaaatcaatgggaagaatcatccccgacgaagattccgat
tctgattatggggacattgcaaatgatgaggatcctcttgaagatgaagatgataatgaa
ttcatgaaaagggtgaaaaagacgaaagtagagaaactatcaatagttgatcattcaaag
attcactatccccctttccggaaagatttttatattgaagttaaggaaatctcaaggatg
acttctgaagaggttgctgtttacaggagacaactggaattgaaactacatggaaaggat
gtgcccaggcctgttaaaacttggcaccagacaggattgtctaccaaaattcttgataca
ataaagaagcttaactttgaaaagcccatgccaatccaagctcaagcactgccaataatt
atgagtggtcgagactgtataggtattgcaaagacaggctctggtaaaacattagcattc
gtgcttccaatgttgaggcatataaaggatcaaccacctttgacgccaggagatggacct
attgggttgataatggcacctaccagagagcttgtgcagcagatccatgccgatatcaag
aagtttgccaaggtaacaggtatcacctgtgtgcctgtgtatggaggttctggtgttgca
caacaaattagtgaactaaagcgaggggctgagattgtggtctgcactccaggtaggatg
attgatatactctgtactagtggtgggaaaattacaaacctgcgcagaataacttatatg
gtcatggatgaagctgatcggatgtttgatatgggttttgaaccccagatcacaagaatt
gttcaaaatactcaaccagaccgtcaaactgtactcttctctgctactttccctcgtcag
gttgaaattttggcacgtaaagttttgaataaacctgtggaaatacaggttggtggtagg
agtgtggtgaataaagacattacccagttagtcgaggtgagaccagaaagtgaccggttt
ttcagactgctagaactacttggggaatggtatgagaagggcaagattttgatatttgta
cactcgcaggagaaatgtgatgctctgttcagggatttacttaaacatggttatccttgc
ctttccctccatggcgctaaggatcagactgatcgtgaatccaccatttctgatttcaaa
agtaatgtttgcaatttgttggttgcaacaagtattgcagccaggggtttagatgtaaag
gagctggaactagtagtcaattttgatgttccaaaccactatgaagattatgttcatcgt
gttggtcggacaggtcgagctggccggaaaggctgtgctatcacctttatttctgaggac
gatgctagatatgcaccggatctcgtgaaagccttagaactctctgagcaagttgttcct
gatgacctcaaaactcttgctgatggtttcatggcaaaggtgaatcagggacttgagcaa
gcccatgggactggttatggtggaagcggttttaaatttaatgaagaagaggatgaagtg
aggagagcagccaagaaagcacaggcgaaagagtatggctttgaggaagacaagtcagat
tcagaagatgaagacgaaggggtccgaaaggcaggtggagatttatctcagcaagctatt
cttgcgcaggcagctgctcttgctgctgcatctaaagtgagcatgggtacaatgtctgca
cctgtctcagctgctcagctgcttccaaacggtggattacccttgtcgttgccaggtgta
cttggtctaaccataccaggtgcagcagcagttgtacctggggctcctttgtcgataact
gctggtgatggggcggctagggcagcggctttggcggcagccatgaacttgcagcataac
ttggcaaagattcaggcagatgccatgcctgaacactatgaagcagaattggagataaat
gaatttcctcaaaatgctcgttggaaggtgacgcacaaggaaactttgggtccgatttct
gaatggactggagctgcaattacaactaggggacaatactttcctcctggtaaggtgcca
gggccaggggaacgcaagctctacttgttcatagagggccctactgaacaatccgttaaa
agggcaaaagcagaattgaagcgtgtgttggaggacattacgactcaagcatcattgctt
ccaggttcagctcagccaggcaggtactcagtgttgtaa
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