Actinidia eriantha (wild kiwifruit): 130763528
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Entry
130763528 CDS
T09464
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 2
KO
K14402
cleavage and polyadenylation specificity factor subunit 2
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
130763528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130763528
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
130763528
U7-dependent histone pre-mRNA processing factors
130763528
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_6
CPSF100_C
Beta-Casp
RMMBL
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
130763528
NCBI-ProteinID:
XP_057475433
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Position
24:17255935..17265331
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AA seq
738 aa
AA seq
DB search
MGTSVQVKPLCGVYNENPLCYLVSVDDFNFLIDCGWNDHFDPSLLQPLSRVASSIDAVLL
SHPDTLHLGALPYAMKRLGLSAPIYSTEPVYRLGLLSMYDQYLSRKQVSEFDLFTLDDID
SAFQNVNRLTYSQNHHLSGKGEGIVIAPHVAGHLLGGTVWKITKDGEDVIYAVDFNHRKE
RHLNGTVLESFVRPAVLITDAYNALNNQPSRRQRDQEFLDAILKTLRADGNVLLPVDTTG
RVLELLLILEQYWAQHHLTYPIFFLTYVASSTIDYVKSFLEWMSDSIAKSFEHTRDNAFL
LKHVTLLINKSELEIVPDGPKIVLASMASLEAGFSHDIFVEWAPETKNLMLFTERGQFGT
LARMLQADPPPKAVKVTMSKRVPLVGDELATYEEEQNRIKKEEALKASIIKEEETSHGSD
PTVADPMVVDASNVHASSDVAVQHSGTFRDIFIDGFVPPSSSFAPMFPFYENNPEWDDFG
EIINPDDYVIKEEDMYQGSLQVGGDLNGKLDEGSASLILDMAPSKVVSNELTVQVKCSLV
YMDFEGRSDGRSLKSILAHVAPLKLVLVHGSAEATEHLKQHCLKHVCPHVYAPQIEETID
VTSDLCAYKVQLSEKLMSNVLFKKLGDYEVAWVDAEVGKTEGGMLSLLPLSTPAPPHKSV
FVGDIKMADFKQFLASKGVPVEFSGGALRCGEYTTLRKVGDASQMGGAAGIQQIIIEGPL
SEEYYKIRDYLYSQFYSL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgggaacgtcggttcaggtgaagccactatgtggagtgtacaacgagaacccactctgt
taccttgtctccgtcgatgacttcaacttcctcattgactgtggatggaacgaccacttc
gacccctctcttcttcagcccctctccagggtggcttcaagcatagatgcagtcttgcta
tcacatccggatacacttcaccttggtgctttaccgtatgcaatgaagcgacttggactc
tctgcacccatttattcaacggagcctgtgtacagattaggccttctaagcatgtatgat
cagtatctctcacggaagcaagtatcagaatttgatttgtttacactggatgacattgat
tctgccttccaaaatgtgaacaggctaacctactctcagaatcatcatctttctgggaaa
ggagaaggaatagttattgctcctcatgttgctgggcatctattgggtggtactgtttgg
aagataacaaaagatggggaggatgttatttatgctgttgacttcaaccatcgcaaagag
aggcatttgaatggaactgttttagaatcgtttgttcgtcctgctgtcctaataacagat
gcttataatgctttgaataatcagccctctagacgtcagagggaccaagaatttctagat
gccatactgaagactctcagggcagatggcaatgtgttgctacctgttgatactaccggt
cgtgtattggaattactattaatactggaacagtattgggcacagcatcacttgacatat
cccatcttcttcctcacctatgttgcatcaagcacaattgattacgtgaagagtttcctt
gagtggatgagtgattcaatagcaaagtcatttgagcacactcgtgataatgcttttctt
ctaaagcatgttactcttctaattaacaagagtgaactggagatagttccagatggtcca
aagattgttctagcatccatggccagtttagaagctggtttctcacacgatatattcgtt
gagtgggctcctgagaccaagaatcttatgcttttcacagaaagagggcagtttggtaca
ttggcccgcatgcttcaggctgatccacctcctaaagcagttaaagtcaccatgtccaag
agggttcctttggttggggatgagttagctacttatgaagaagagcaaaaccgaataaaa
aaggaagaagctttgaaagccagcattatcaaagaggaggaaacatcccatggatctgat
cctactgtcgctgatccaatggtcgttgatgctagcaatgttcatgcttcatcagatgtt
gctgtccagcacagtggaacattccgggacatatttattgatggatttgttccaccatcc
tccagttttgctccaatgtttcccttctatgaaaacaaccctgaatgggatgacttcggt
gaaatcatcaatcctgatgattatgttatcaaggaagaagatatgtaccaaggatccttg
caggttggtggagatctgaatggaaaacttgatgaaggatcggctagtttaatacttgac
atggcaccttcaaaagttgtctctaatgaattgaccgtgcaagtgaagtgttcgctggtt
tacatggattttgagggccgttccgatggccgctcacttaaatcaattctggcccatgtg
gctcctttaaagctagtcttggtgcatggatcagcggaggccactgagcatttgaagcaa
cactgcttaaaacatgtttgcccccatgtatatgctccccaaattgaagaaacaattgat
gtcacctcagatttgtgtgcttacaaggtgcaactttctgagaagctgatgagtaatgtg
ctctttaagaagcttggagattatgaagtagcttgggttgatgctgaagtagggaagaca
gagggtggcatgctctctctgcttcctctctcaactccagctccgccgcacaagtcagtc
tttgtcggtgatataaaaatggcagatttcaagcagtttcttgcaagcaaaggcgtgccg
gttgaattttcaggtggggcgttgcgatgcggcgagtacacgacgctacgcaaggttgga
gatgcaagccagatgggcggtgctgctggtattcagcagatcattattgagggccctcta
tccgaggagtattataagattcgggattatctctattcgcagttttattctctttaa
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