Actinidia eriantha (wild kiwifruit): 130763546
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Entry
130763546 CDS
T09464
Name
(RefSeq) spliceosome-associated protein 130 A
KO
K12830
splicing factor 3B subunit 3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130763546
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130763546
03041 Spliceosome [BR:
aew03041
]
130763546
03036 Chromosome and associated proteins [BR:
aew03036
]
130763546
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130763546
Spliceosome [BR:
aew03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
130763546
Complex B
130763546
Complex C
U2 SnRNP specific factors
130763546
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
130763546
TFTC complex
130763546
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
Beta-prop_RSE1_2nd
CPSF_A
Beta-prop_EML_2
Beta-prop_BBS7
WDR55
Motif
Other DBs
NCBI-GeneID:
130763546
NCBI-ProteinID:
XP_057475463
LinkDB
All DBs
Position
3:3400054..3407315
Genome browser
AA seq
1212 aa
AA seq
DB search
MYLYNLTLQQATGIVCAINGNFSGGKTQEIAVARGKVLDLLRPDDNGKIQTLLSVDVFGA
IRSLAQFRLTGAQKDYIVIGSDSGRIVILEYNKEKNVFDKVHQETFGKSGCRRIVPGQYL
AVDPKGRAVMIGACEKQKLVYVLNRDTAARLTISSPLEAHKSHTISYSVCGVDCGFDNPM
FAAIELDYSEADQDSTGQAAAEAQKHLTFYELDLGLNHVSRKWSDQVDNGANMLVTVPGG
GDGPSGVLVCAENFVIYKNQGHPDVRAVIPRRGDLPAERGVLIVSAAMHKQKSMFFFLLQ
TEYGDVFKVTLDHDNDRVKELKIKYFDTIPVTSALCVLKSGFLFAASEFGNHALYQFQAI
GDEPDVESSSATLMETDEGFQPIYFQPRRFKNLVRIDQVESLMPIMDMKVVNLFEEEAPQ
VFSLCGRGPRSSLRILRPGLGISEMAVSQLPGVPSAVWTVKKNINDEFDAYIVVSFANAT
LVLSIGETVEEVSDSGFLDTTPSLAVSLIGDDSLMQVHPSGIRHIREDGRINEWRTPGKR
TIVKVGSNRLQVVIALSGGELIYFEVDMTGQLMEVEKHEMSGDVACLDIAPVPEGRQRSR
FLAVGSYDNCIRILSLDPDDCMQVLSLQSVSSPPESLLFLEVQASIGGEDGADHPASLFL
NAGLQNGVLFRTVVDMVTGQLSDARSRFLGLRAPKLFSVVVRGRHAMLCLSSRPWLGYIH
QGHFLLTPLSYESLEYAASFSSDQCAEGVVAVAGDALRVFTIERLGETFNETAIPLRYTP
RKFVLQPKRKLLVIIESDQGAFTAEEREAYKKECFDDAGMGENGKVEQMENGGDDEDKED
PLSDEQFGYPKAESGKWVSCIRVLDPRTANTTCLLELQDNEAAFSICMVNFHDKEYGTLL
AVGTAKGLQFLPKRSLAAGYIHIYRFLEDGKSLELLHKTQVDGVPLALCQFQGRLLAGIG
PMLRLYDLGKRRLLRKCENKLFPNTITSIHTYRDRIYVGDIQESFHYCKYRRDENQLYIF
ADDSVPRWLTASYHVDFDTMAGADKFGNIYFVRLPQDVSDEIEEDPTGGKIKWEQGKLNG
APNKMEEIVQFHVGDVVTCLQKASLIPGGGECLLYGTVMGSLGALLAFTSRDDVDFFSHL
EMHMRQEHPPLCGRDHMAYRSAYFPVKDVIDGDLCEQFPTLPMDLQRKIADELDRTPGEI
LKKLEEVRNKII
NT seq
3639 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctacaatctcactctgcaacaagccaccggcatagtctgcgccatcaacggc
aacttctccggcggaaaaacccaagaaatcgccgtagcgagaggcaaagtcctcgatctc
ctccgaccggacgacaacggtaagatccaaaccctactttctgttgatgttttcggtgca
attaggtctttggctcaatttaggttaactggtgcccaaaaggactatatcgtaataggg
tccgattcgggtcgaatcgtgattctagaatacaacaaggagaagaatgtgttcgacaaa
gttcaccaggaaacgtttgggaaatcaggttgtcgccggattgttccggggcagtacctg
gcggtagaccccaagggtcgtgccgtgatgatcggggcttgtgagaagcagaagctagtt
tatgtgttgaatagggatactgcggctaggctgaccatttcgtcacctttagaggcgcat
aaatcgcacacaattagttattcagtgtgtggggttgattgcgggtttgataacccgatg
tttgccgctattgagttggattactcagaggcagatcaggattcgactgggcaggctgca
gccgaagcccagaagcacttgaccttttatgagcttgatcttgggcttaatcacgtttca
aggaaatggtctgatcaggttgataatggtgctaatatgcttgtgactgtaccgggaggt
ggggatggaccgagtggtgtgcttgtgtgtgcggagaatttcgtgatatataagaatcag
ggtcatccggatgtacgtgctgttattcctaggcggggggatttaccagctgagcgtggg
gttcttatagtttcggctgctatgcacaagcagaagtctatgttcttctttcttttgcaa
acggagtatggagatgtgttcaaggtcacgttggatcacgacaatgaccgtgtcaaggag
ttgaaaattaagtatttcgatacgattcccgtgacgtctgccttatgtgtcttgaaatcg
gggtttctgtttgctgcttcggaatttgggaatcatgctttgtatcagtttcaggctatt
ggggatgagcctgatgtggagtcttcatcagctaccttaatggaaacagacgaaggtttc
cagcctatatatttccagcctagaagatttaagaatcttgttaggatagaccaggttgag
agcttaatgccaattatggacatgaaagtcgtaaatctttttgaagaagaagctcctcaa
gttttttcactttgtgggaggggtcctcggtcatctctaagaatactaagaccaggtttg
ggcataagtgaaatggctgtgtcacagcttcctggagtcccaagtgctgtctggacagtg
aagaaaaacataaatgatgaatttgatgcttacatcgttgtttcatttgcaaatgcaact
cttgtcctttcaattggtgagactgtagaagaagttagtgatagtggattccttgatacg
accccttcacttgctgtttcactgataggtgatgattctctaatgcaagttcatccgagt
ggtattaggcatataagggaagatgggcgtattaatgagtggagaactcctggaaagaga
acgattgttaaggttggatctaatagacttcaagtggttattgcactgagtggaggagag
cttatatattttgaggtggatatgactggccagttgatggaggttgagaagcatgaaatg
tctggggatgtggcttgtttggacattgcccctgttcctgaaggacggcaaagatctcgt
ttccttgcagttggatcatatgacaattgcattcgtatcttatctttggatcctgatgac
tgtatgcaggttttaagtctgcaaagtgtctcgtcacctccagaatctcttctctttctt
gaagtccaggcatctatcggcggggaggatggtgcagatcaccctgctagcctttttcta
aatgctggtttacagaacggagttttgttcagaacagtggtagacatggtgacaggtcaa
ctttcggatgcccgttccagattcttaggactgagagccccgaagctcttttctgtggtt
gtaagagggcggcatgctatgctttgcctgtcaagtagaccctggttgggttacattcac
caaggtcatttccttctaacgcccctttcatacgagtctcttgaatatgcggcatcattt
tcatctgaccagtgtgcggaaggtgtagttgctgttgctggggatgcattaagggttttt
actattgagagattgggggaaacatttaatgaaactgcgattcctttgaggtacacacca
aggaaatttgtgctccaaccaaagaggaaacttttggttattattgagagtgatcaagga
gcattcacagcagaagaacgtgaagcctacaaaaaggagtgctttgatgatgctggaatg
ggcgaaaacggcaaggtggagcagatggagaatggtggtgatgatgaggataaggaggat
cccctttctgatgagcagttcggttacccaaaggcggagtcaggcaagtgggtttcttgc
atcagagttcttgacccaaggacagcaaacactacttgtttgcttgagcttcaggacaat
gaagctgctttcagcatttgcatggtaaatttccatgataaagaatatggaactctttta
gctgttggaactgcaaagggcctgcaatttttgcccaaaagatctcttgctgctgggtat
attcatatttataggtttttggaagatgggaaatcccttgaacttttgcacaagacacaa
gtggatggtgttcctcttgctttgtgccagttccagggaagattacttgctggaatagga
cctatgctcagattgtatgatttggggaaaaggaggttgcttaggaagtgcgagaataag
ctgttccccaacacaatcacctcgattcatacctatcgcgatcgtatctacgtgggtgac
attcaggagtcattccattattgcaagtacagacgtgatgagaatcagttatatatattt
gctgatgattctgttccaagatggcttactgcatcataccacgtagattttgacaccatg
gctggtgcagacaagtttggaaatatctattttgtgcggttaccacaggatgtgtcagat
gagatcgaagaagatccaactggtgggaagataaagtgggagcaggggaagctgaatgga
gcccctaacaagatggaggaaatagtgcagtttcatgttggtgatgtagtcacatgcttg
caaaaggcatctctaattccaggcggtggcgaatgtctcttatatgggactgtaatgggg
agtttgggtgcattacttgctttcacttcacgagacgatgtggacttcttttctcatttg
gagatgcatatgaggcaggaacacccgcctctgtgtggaagagatcatatggcctataga
tctgcctatttccctgtcaaggatgtgattgatggagatctgtgtgagcagtttccaaca
ttgccaatggatttgcaacggaaaattgccgatgaattggatagaacaccgggagagata
ctgaagaaacttgaagaagttcgaaataaaatcatttga
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integrated database retrieval system
