Actinidia eriantha (wild kiwifruit): 130764212
Help
Entry
130764212 CDS
T09464
Name
(RefSeq) probable pectate lyase 13 isoform X1
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew00040
Pentose and glucuronate interconversions
aew01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130764212
Enzymes [BR:
aew01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
130764212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Toxin_13
Motif
Other DBs
NCBI-GeneID:
130764212
NCBI-ProteinID:
XP_057476293
LinkDB
All DBs
Position
24:complement(10480339..10490057)
Genome browser
AA seq
492 aa
AA seq
DB search
MLPHTCILVFSLLTSLSPLIRASLNLTLPHQHPNPEAVVQDVQRQLNVSISRREMLAAAE
SSCRTGNPIDDCWRCDTNWAANRQKLADCGVGFGRAALGGKGGKIYVVSDSSDHSPADPT
PGTLRYAVIQTDPLWIVFASNMEIKLKHELIVNSFKTIDGRGANVRITGGGCITLQYVSN
VIIHNIHVTRCVPSGNTNIRSSPTHVGYRGKSDGDGISIFSSRNIWIDHCSLSYCTDGLI
DAIMGSTAITISNSYFSHHDEVMLLGHDDKYLPDSGMQVTIAFNHFGEKLVQRMPRCRRG
YIHVVNNDFSEWQMYAIGGSANPTINSQGNRYTAPVDPDAKEVTKRVETDENEWSDWNWR
TDGDILVNGAFFVPSGIGLSQYTKASSVEPKSASLINQLTMNAGVFGDPRDSSGSITYPG
FSGGTSSATTGNGVGSSGGDYFGMIFGSDAAPSSSSLSTTTTILLSLLIILTLYITTNHG
AVLSLPLLLLLL
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcttccccacacctgcattctcgtgttctctctcttgacctctctctctcctcttatt
agggccagtctcaatctcactctccctcaccaacaccccaaccctgaagctgtggttcaa
gatgtgcagaggcaactaaacgtatccatatccagaagagaaatgctagccgccgccgag
tcgtcgtgccgcaccgggaacccaatcgacgactgctggcggtgcgacactaactgggct
gccaaccgccagaagctcgccgactgtggcgtcggcttcggccgcgccgccctcggcgga
aagggtggcaagatctacgtcgtcagcgactcctccgaccactcgccggccgaccccact
ccgggaactctccggtacgccgtcatccagacggaccccctctggatcgtcttcgcctcc
aacatggagatcaagctcaagcacgagctgattgtcaacagcttcaaaaccatcgacggc
cgcggcgctaacgtgcgcataaccggcgggggctgcattacgctacagtacgtcagtaac
gtcataatccacaacatccacgtcactcgctgtgtcccctcgggaaatactaacatacgg
tcgagcccaactcacgttgggtacagaggcaaatcggacggcgatggcatctccatattc
agctcccgaaacatctggatcgaccactgctctctctcctactgtacggacggcctgatc
gacgccatcatggggtccacggcgatcacgatatcgaacagctatttctcgcaccacgac
gaggtgatgctattgggccacgacgacaagtacttgccggactccgggatgcaggtgacc
atagcctttaaccacttcggtgagaagctggtgcagcgtatgcctcggtgtagacgcggg
tacatacacgtggtaaataatgatttctccgagtggcagatgtatgccatcggcggtagc
gctaaccctaccattaacagccaagggaaccgctacactgcgcccgtggaccctgacgcc
aaagaggtgacgaagcgcgtggagacggacgagaacgagtggtcggactggaactggagg
acagacggggacatactggtaaatggagcattcttcgtgccgtcgggtatagggctgagc
cagtacaccaaggcctccagcgttgagcccaagtccgccagcctaattaaccagctcacc
atgaatgcaggtgtcttcggggatccaagggacagcagtgggagcataacgtaccccgga
ttcagtggcgggaccagctctgccaccactggaaacggcgtggggtccagcggtggggac
tactttggaatgatattcgggagcgatgcggcgccatcatcttcgtctttatctaccacc
accaccatccttctgtctcttttaattattttgactctgtacattaccaccaaccatggt
gctgtattgtcattaccattattattattattactatag
DBGET
integrated database retrieval system
