KEGG   Actinidia eriantha (wild kiwifruit): 130764213
Entry
130764213         CDS       T09464                                 
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
aew  Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:aew00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:aew03009]
    130764213
Ribosome biogenesis [BR:aew03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    130764213
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz Beta-prop_EML_2 WD40_WDHD1_1st WDR55 EIF3I Beta-prop_EML NBCH_WD40 Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd Beta-prop_VPS8 Beta-prop_HPS5 WDR90_beta-prop_4th WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_DCAF4 Beta-prop_RIG_2nd Beta-prop_SCAP Beta-prop_LRRK2 WDR54 Beta-prop_WDR75_1st Beta-prop_Vps41 Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_BBS7 BCAS3_WD40 PEP5_VPS11_N S-Me-THD_N
Other DBs
NCBI-GeneID: 130764213
NCBI-ProteinID: XP_057476296
LinkDB
Position
24:14776054..14794232
AA seq 454 aa
MDPELVIASSAADAGIGCWDLHSGAEHLHYRSCASPPHGLVCVGRCFLASSQLRPPSSSS
SGSVLYWSWNKPQVEVKSFPAEPINPLASNSDGTYIVGGGASGDMYLWEVATGRLLKKWH
AHYRAVTCLVFSDDQSLLISGAEDGSVRVWSLLMIFDDMRREQARHLYEYSFSEHTLRVT
DIATGYGGCNAIIVSASEDRTCKVWSLSKGKLLRNIVFPSIIDAIALDPGEHVFYAGGRD
GKIYIAALTAQGTSSNSYGMHIIGSLADHSNPVTCLAFDADGVLLVSGYEDGVVRVWDTK
SHNIVRVFKHAKGPVNNILVARPPLCSNPRMLLNSQSSSIRRHGSSLPPPLEKYTNSTDE
ILEVKAYLSTEATSDTPLDASYISIQTMNNQIKELQQQGSSAAAGMEMDRLKLDYKKSSQ
MVQQWKKMYENLHEFCVNELLDGDQAGDCNGNST
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggatccggaactagtgatcgcttcgtcggccgccgatgctggcataggttgctgggac
ctgcactccggcgcggagcaccttcattaccggtcgtgcgcctcccctccccacggcctt
gtgtgcgttggccgctgtttcctagcctcctctcagctccgcccaccctcttcctcttcc
tccggctccgtcctctactggtcctggaacaagcctcaagtggaagttaagagcttccca
gcagagccaatcaatccgctcgcctctaatagtgatgggacttatattgttggaggaggt
gcttctggggatatgtatttatgggaggttgcgacgggaagactgcttaagaagtggcat
gctcattatagagctgttacttgtttggtattctccgacgatcagtctctattgatttct
ggggcagaggatggatcagttagagtctggtctcttctcatgatatttgatgatatgcgg
agggagcaagcaaggcacctctatgagtatagcttctctgagcacactttacgtgtgact
gatattgccacgggttacggaggatgtaatgcaattatagtgtccgcttctgaggatagg
acatgcaaggtttggagcttatcaaaggggaagctattgagaaatattgtattcccatca
ataatcgatgcaattgcattggaccctggtgagcatgtcttttatgccggaggtagagat
ggcaagatctacattgctgcactcaccgctcaaggcacctccagcaacagttatggaatg
catattattggttcattggctgatcacagtaaccctgtcacttgcttagctttcgatgcg
gatggagtgttgttggtgtctggctatgaagatggagtagttagagtctgggacactaaa
agtcataacatcgttcgggttttcaaacatgcgaaaggtcctgttaacaacattcttgtt
gctagacctccactgtgctcaaatcctcggatgttactgaattctcaatcttcttccata
agaaggcatgggtcttcattgccacctccattggagaagtacacaaattcaacagatgaa
attctagaagttaaggcttatctcagtaccgaagctacttctgatactcctttggatgct
tcatacatcagtattcagactatgaataatcaaatcaaagaactacagcaacaaggttct
tctgcagctgctggaatggagatggatcgactaaagcttgattacaaaaagtcttcgcaa
atggtccagcagtggaagaaaatgtatgaaaacttgcacgaattttgtgtaaatgagctt
ttggacggagatcaagcaggtgattgcaatggaaactcaacctga

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