Actinidia eriantha (wild kiwifruit): 130764511
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Entry
130764511 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130764511 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130764511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aew03000
]
130764511
03019 Messenger RNA biogenesis [BR:
aew03019
]
130764511
04121 Ubiquitin system [BR:
aew04121
]
130764511
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130764511
Transcription factors [BR:
aew03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
130764511
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130764511
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130764511
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130764511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
Rtf2
Baculo_IE-1
FYVE
zf-TFIIIC
Motif
Other DBs
NCBI-GeneID:
130764511
NCBI-ProteinID:
XP_057476783
LinkDB
All DBs
Position
24:12202542..12214726
Genome browser
AA seq
903 aa
AA seq
DB search
MVNMSNEGEKKCPLCAEEMDWTDQQFNPCKCGYKVCVWCWHHIMDIAEKDETEGRCPACR
TPYDKEKIVAMEANCQRMVSTKKEQKSKPQKAKPKKSEGSKDLTSVRVIQRRMAYVIGLP
LSLADENLLQRKEYFGQYGKVTKVSLSRTAGGAIQQFVNDTCSVYITYSKEEEAIRCIQS
VHGFVLEGRFLRASFGTAKYCHAWLRNMPCINSACLYLHSIGADEDSFSKDEEAAVHTRN
RVHQIVGATHNMQRCSGNMLPPPIDDPFNSSRVGSDKTAQRDITHSTVNSNGHLTCSHSS
KDKDGRIKTPNRTFVDIVGGSSSGPEKDGSVAEERKILSLYSDFSSGTMDEGNHLETQYS
NSMLCKVSSLGHLPIGLARDNDYQGYFNPFRESSKFSVFGGTDFTSSDSCIVKGQSCLMS
DSEKQVWPGSCIDVREDLLSFDDQRSKGSDSLSQGSSVLSSSYPIRISDCSNGHVQQHKE
THSLSDYNLEHSTVHNHVDEASIPFTYVNSVATDGYSERKFQSFTEPDRNFRSSKSFSNE
EIVEQLRRLDDDNITNDGDSSALNVVESSIISNILSMDFDSCDDSLTSNGLADLFDGTGG
RHGSWNFRKSDESRFSFAKKENSENQETVFDSSLSTIGQVSKKYSSLPDSLENKEHYFSG
PRHHVSRAQSLTPPGFSVPSREPPPGFSARERINQGFGASSGSNLVETSSLANNLYYARS
AGNMNNAHDFDFMDPAVLAVGRGKSTNMLNNSSFEGRSTSTLQPINYEDEAKLWHLMQQS
GSYHQDPKYPPMFSQENQSANWERGFSGHTGNGFSATNDTYGYSLMLMDQQQTAYNPNPF
PPTRLSQQKYRNGHISNGYHPGLNEAENPRNERIALNKYYPGYGDLVLQMPGTGDVYNRV
YGL
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacatgagcaacgaaggagagaagaagtgtccactatgcgccgaagaaatggac
tggacggatcagcaatttaatccctgcaaatgtggttataaggtgtgtgtttggtgttgg
catcatataatggacatagctgagaaagatgagacggaggggcgatgtcctgcatgccga
acaccttatgacaaggaaaaaattgtggcgatggaagcaaactgtcaaaggatggtgtca
acaaagaaagaacaaaaaagtaaaccacagaaggcgaagccgaaaaaatctgaaggaagt
aaggacctaactagtgttagagtgatccagcggagaatggcgtatgtaatcggacttcct
cttagtctagctgatgaaaatcttctacagcggaaggaatattttggtcaatatggaaaa
gttacaaaggtttccctatctcggacagcaggtggggctattcagcaatttgtcaatgac
acttgtagcgtatatattacttactcaaaagaggaggaggcgatacggtgtattcaatca
gtacatggttttgtcctggaaggtaggtttttaagagcatcgtttggaactgcgaaatat
tgccatgcatggttgagaaacatgccttgcatcaattctgcttgtttatatttacatagc
attggcgctgatgaggatagtttcagtaaagatgaagaagctgcagtgcatacaaggaat
agagttcaccaaattgtgggtgctacgcataatatgcaacggtgctcagggaatatgttg
cctcccccgatagatgatcccttcaatagcagtagagttggaagtgataaaactgcccaa
agagacataactcattctacagtaaattccaatggccacttgacttgttcacattcttct
aaagacaaggatggacgcattaaaacacctaacagaacttttgtagatattgttggaggt
tctagttcaggtccagaaaaagatggtagtgttgctgaagagaggaagatattaagcttg
tactctgatttctcttcaggaaccatggatgaaggcaatcatcttgagactcaatattca
aattctatgctatgtaaggtttcttctttgggacatctgcccattggactagccagggat
aacgattatcaaggatatttcaatccatttagagaatcttcaaaattttcagtttttggg
ggaactgattttacatccagtgattcgtgcattgtgaaaggacaatcttgtttgatgtca
gactcagaaaaacaagtatggcctggttcatgcattgatgtgagagaagatttattatct
tttgatgatcagagatcgaagggttctgacagtttaagtcaggggtcttctgtgctttct
tcatcttatccaattaggatttctgactgttctaatggtcatgttcagcagcataaagaa
actcacagtttgagtgattacaacttggagcatagcactgtacataatcatgtcgatgaa
gcttctataccatttacatatgtaaattcagtagctactgatggatacagtgagagaaaa
ttccaaagttttactgaaccagatagaaattttagatcttctaaatcgttctccaatgag
gaaatagtggaacaattaagaaggcttgatgatgataatatcactaacgatggtgacagt
tctgccttaaatgtggtcgaaagcagtataatatcaaatatcttgtcgatggattttgat
tcatgcgatgattccttgacaagcaacggcttagctgatttgtttgatggaactggtggg
cggcatgggtcttggaattttcgtaagagtgatgaatccaggttctcatttgcaaaaaaa
gagaattccgagaatcaagaaactgttttcgactcgtctctcagtaccattggtcaggtc
tcaaagaaatattcttcccttccagattccttggaaaacaaggagcactactttagtggg
ccacgacatcatgtatccagggctcaaagtttgactccaccaggattttcagtgccatcg
agagaaccacctccagggttttctgcacgcgagagaataaaccagggttttggtgcctcc
tctgggagtaatctggtcgagacctcttccttggcaaacaatctgtattatgcacggtca
gcaggaaatatgaacaatgctcacgactttgattttatggatcctgctgtattagctgtc
ggtaggggtaaatcaacaaacatgttgaacaattccagcttcgaaggaagatcaacttct
actctgcagcctattaactacgaagacgaggcaaaactgtggcacttgatgcaacaatct
ggatcttaccatcaggacccaaaatatcctccgatgttctctcaagagaatcaatctgct
aattgggaacgtgggttttccggtcacactgggaatgggttttctgccacgaatgatacg
tatggttattctttgatgcttatggatcaacagcagacagcctataaccccaacccattt
cctcctacacggttgtcgcagcagaaatacagaaatgggcacatttctaatggatatcac
ccaggtctgaacgaggctgaaaatccgagaaacgagagaatagctttgaacaagtactat
cccggatacggggatttagtgttgcagatgcctggcacaggtgatgtatacaatagagta
tatgggttgtaa
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