KEGG   Actinidia eriantha (wild kiwifruit): 130765717
Entry
130765717         CDS       T09464                                 
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03013  Nucleocytoplasmic transport
aew03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130765717
  09122 Translation
   03013 Nucleocytoplasmic transport
    130765717
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130765717
   03041 Spliceosome [BR:aew03041]
    130765717
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     130765717
Spliceosome [BR:aew03041]
 Complex C
  Other components
   EJC/TREX
    130765717
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130765717
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2 LIM_bind YkyA FapA FlxA
Other DBs
NCBI-GeneID: 130765717
NCBI-ProteinID: XP_057478199
LinkDB
Position
25:6198130..6249461
AA seq 1799 aa
MTGEHRARLIKLAKWLVESAIVPLRLFQERCEEEFLWESEMIKIKAADLKSKEVRVNTRL
LYQQTKFNLLREESEGYAKLVTLLRQGSEASTQNTSAATVGIIKSLIGHFDLDPNRVFDI
VLECFELQPSNSVFLDLIPIFPKSHASQILGFKFQYYQRMEVNHSVPFGLYQLTALLVKE
DFIDLDSIYSHLLPKDDEAFEHYNAFSAKRFDEANKIGKINLAATGKDLMDDEKQGDVTI
DLFSALDIESEAVTERASELENNQTLGLLTGFLSVNDWYHAHILFDRLSPLNPAEHSQIC
NELFRLIEKSLSSANELIRQTQIQILALPSAAGSDSMETNSYVYRSFVNLPKELFEMLSC
AGPYLYRDTLLLQKVCRVLRGYYQSAIDLVSAGDGSFNPGSGIGGNQTPRLHLKEARLRI
EEALGTCLLPSLQLTPANPAVGQEIWEVMNLLPYEGRYRLYGEWEKDDERIPMVLSARQT
AKLDTRRILKRLAKENLKQLGRMVAKLSHANPMTVLRTIVHQIEAYRDMITPVVDAFKYL
TQLEYDILEYVVIERLAQGGREKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQY
LVNQLKKGNGIELVLLQELIQQMANVQYTENMTEEQLDAMAGSDTLRYQATSFGITRNNK
ALIKSTNRLRDSLLPKEEPKLAIPLLLLIAQHRSVVVINANVPYIKMVSEQFDRCHGTLL
QYVDFLCSAVAPTSAYAQLIPPLEDLVHLYHLDPEVAFLIYRPVMRLFKCQSSSDVFWPL
DDVAAPKTSIAEKDSEQADSSAKLVLDLGPSWKPITWSNLLDTVSTMLPSKAWNSLSPDL
YATFWGLTLYDLYVPRSRYESEISKQHTALKALEELSDNSSSAITKRKKDKERIQESLDR
LTSELQKHEENVASVRRRIAREKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCA
MFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLHETLKIAYYWKSD
ESIYERECGNMPGFAVYYRYPNSQRVTYSQFIKVHWKWSQRITKLLIQCLESTEYMEIRN
ALLLLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWITEEE
FGMGYLELKPAPSLASKSLASNLVSVQNGSGINVQSEPAGGRVVGTGDQMLITKTADGRV
DRTESASLKSETGHVKLKGSSLVNGSDGQASLPSASVQAGASKSIENQKLMGDATNQTFD
EDVTKVGSKTSTESEVRASVKRSLPAGSVSKQPRQDLSKDDNKSGKAVGRTSGSFSTIER
DLVHPLEGRLGGTANVSSPGAATGSTLPTSVKSSTQSAKSLDIHSGEPKVESVVAKSSDL
RASAIKDDSTDVSDVQRPPSSRPVHSPRTDNSIIASKSGDKPHKRASPAEEPDRLNKRRK
GETDSRDLDGDVRFSDRERSIDPRLADKHLPVDLDKLASDEQTVNRLTDKHLDRSKDKGT
ERYDRDYRERLERPEKSRADDNMLEKSRDRSMERHGRERSVEKGQDRGSDRGFDRLTEKS
KDERNRDDRSKVRYNETSTEKSHVDDRFHGQNLPPPPPLPPHMVPQSVNAGRRDDDADRR
FGTARHSQRLSPRHEERERRRSEENAFVSQDDAKRRREEDFRDRKREERDGLSVKVEERE
REREREKTSLLKEDIDANAASKRRKLKREHLPEPGEYSPAAPPPPPLNIAMSQPYDGRDR
VDRKGAIVQCPGYLEEPGMRIHGKEATSKIARRDTEQMYDREWDDEKRQRAEPKRRHRK
NT seq 5400 nt   +upstreamnt  +downstreamnt
atgacgggagagcatcgcgctcgactcattaaattggcaaaatggctggtggaatctgca
atagtcccactaaggctttttcaggagcgttgtgaggaagaatttttgtgggaatctgaa
atgatcaagataaaggctgcagatttaaagtctaaagaggtcagagtaaacacacgtttg
ctttatcaacaaacaaaatttaaccttcttcgggaagagagtgagggttatgccaagctg
gttacactccttcgtcaaggttctgaagcatcaacacaaaatacgtcagcagcgacagtt
ggcataattaagtcgctgatcggacattttgatctggatccgaatcgtgtgtttgatatt
gtattggagtgtttcgaacttcagcctagtaacagcgttttcttggatctgattcctatt
tttcccaagtctcatgcttcccagattcttggtttcaagtttcaatattatcagcgtatg
gaagtgaatcactctgtaccatttgggctctatcagctgacagctctactggtgaaggaa
gatttcattgatcttgatagcatatattcacatttacttcccaaggatgacgaggcattt
gagcattataatgccttttctgctaagcgatttgatgaggctaataaaattggtaaaata
aatctagctgccactggaaaggatcttatggatgatgagaagcaaggagatgtgacaata
gatcttttttctgctctagacattgaaagtgaagccgtaactgaacgagcttcagagctt
gaaaataatcaaactctgggtttgcttactggatttctttcagtgaatgactggtatcat
gcccatatactttttgatcgtctttcacctcttaatccggcggagcatagtcaaatttgt
aacgaattgtttaggctcattgaaaaatctctctcttcagccaatgaacttattcgtcaa
acacagattcagattttggcgttgccttcagcagctggtagtgattcaatggaaacaaat
tcatacgtctatagatccttcgttaatcttccaaaagagctttttgagatgctctcttgt
gctggaccttatctttaccgtgatacattgctgctgcagaaggtatgtagagtattaaga
ggctattaccagtctgcaattgaccttgtcagtgccggtgatggatcttttaatcctgga
agtggtattggtggaaatcaaactcctcgtctgcacctgaaggaagccaggttaaggatt
gaagaagccctgggaacatgcctacttccttctttacaattgacacctgcaaatccagcc
gttgggcaggagatatgggaagttatgaatctccttccatacgaggggcgatatcgtttg
tacggtgaatgggaaaaagatgatgagcggattccaatggttttatcggctaggcaaaca
gcaaagctagatactagaaggatcttgaaacggcttgcaaaggaaaacctaaagcagctg
ggtcgaatggttgctaaactatctcatgccaatcccatgacagtgcttcgaacaattgtt
catcagatagaggcatacagggatatgattactcctgtggtggatgcattcaagtacttg
acacagcttgagtatgatattttggagtatgttgtgattgagcgcttggcacaaggtggg
cgcgagaagcttaaagatgacggccttaatttgtcggactggcttcaatccctggcttcg
ttttggggtcacttgtgcaaaaaatacccatcaatggaactgagaggtcttttccagtat
ctcgtgaatcaattgaaaaaagggaatggaattgaacttgttctcctgcaggagcttatc
cagcaaatggcaaatgtccaatacactgaaaatatgactgaggaacagttggatgccatg
gcagggagtgacactctccggtatcaggctacttcttttgggataacccgaaacaacaag
gcattgatcaaatccactaacaggctaagggactcattgcttccaaaggaggaaccaaaa
ttagcaattccgctgttgttacttattgcccaacatcgttctgtggttgtcataaatgca
aatgtgccatatattaagatggttagcgagcagttcgatagatgccacggaaccctcctt
caatatgtggacttcctgtgtagtgcagtggcgccaacatcagcatacgctcagctgatt
ccccctcttgaggatcttgtgcacctttatcatcttgatcccgaggtggccttcttaatt
tatcgacctgtgatgaggctcttcaaatgtcagagtagttctgatgtcttctggccttta
gatgatgttgcagctccaaagacctcaattgcagaaaaggattctgaacaagcagattca
tctgccaaattggttctggatcttggtccttcttggaagcctataacgtggtcaaatctt
cttgatactgttagtacaatgttgccttcaaaggcatggaacagcctctctccagacctg
tatgctactttttggggtcttacactatatgatctttatgttcctagaagccgttatgag
tctgaaatttccaagcagcatactgctcttaaagctctagaggaactctctgataattca
agctctgcaatcacaaaaaggaagaaagacaaggaaagaatacaagaatccttggatcgt
cttactagtgaactccagaagcatgaagaaaatgttgcatctgttcgtagacggattgct
cgtgagaaggataagtggttgagctcctgcccagataccttaaagattaacatggagttc
cttcaacgctgtattttcccacgatgtactttcagtatgcctgatgctgtttattgcgcc
atgtttgtacatactcttcattctctaggcacaccgtttttcaacacagtcaaccacatt
gatgttctgatatgtaaaaccttgcaacctatgatatgctgttgcactgagtatgaagcg
ggtcgacttgggaggtttttacacgagacattgaagattgcatactactggaagagtgat
gaatcaatatatgaacgggagtgtggaaatatgccaggttttgccgtctattataggtat
ccaaacagccagcgtgtcacttatagtcagtttattaaggtgcactggaaatggagtcag
aggatcacaaagttgctgattcaatgtctggaatccaccgagtacatggaaatccgaaat
gctcttttactgttgacaaaaatttctagtgtttttcctgtcactcgaaagagtggcata
aaccttgaaaaacgggttgctaaaattaaaagtgacgaaagagaggatctcaaggtgttg
gctacaggagttgctgcagccttggctgctaggaagccttcatggattacagaagaagaa
tttggcatgggttatcttgaactcaagcctgccccttcgcttgcttcaaaatctttagct
agtaatttagtttctgtacaaaatggttctggcattaatgtccaaagtgaacctgctgga
ggaagagttgttggcacaggggaccagatgttaataacaaaaactgcggatgggagggtt
gacagaacagaaagtgcttcactaaaatctgagactggacatgtaaaacttaaaggtagc
tcattagttaatggctcagatggtcaggcttctctgccgtctgcttctgtacaagctgga
gcatccaaatccattgaaaatcagaaactgatgggtgatgccacaaaccaaacattcgat
gaggatgtcaccaaagttggatcaaagacatcgacagaatcagaggtaagagcttctgta
aaaaggtcattgcctgctgggtctgtttcaaagcaacccaggcaggaccttagtaaagat
gataacaagtccggaaaagctgttggcagaacatcaggctctttttctaccattgagagg
gatctcgtgcatccacttgaagggaggctaggtgggacagctaatgtttcttctccagga
gctgccactggcagtacacttccaacttcagttaaaagctctactcaatcagcgaaatcg
cttgatatccatagcggtgaaccaaaggtagagagtgtagttgcgaagtcttctgatttg
agggcctctgctataaaagatgatagcactgatgtttctgatgtgcaaagacccccatct
tccagacctgttcattctcctagaactgataattccattatagcttcaaaatctggcgat
aaacctcacaagagagccagccctgctgaagaaccggaccgactaaataagcgtcggaaa
ggggaaactgattcaagagatttagatggtgatgttagattctctgatagagagaggtca
attgatccgcgattagcggataaacatcttccagttgatcttgacaaattagcatcagat
gagcaaactgttaataggcttacagataagcacttggacagatccaaagataaggggacc
gagagatatgacagggactacagggaaaggttagagcgtcctgaaaagtcccgtgcagat
gacaatatgttggaaaaatcaagagataggtcaatggaaaggcatgggagagaacgttct
gtagaaaaggggcaagacagaggttctgataggggttttgataggcttacagaaaaatct
aaggatgaaagaaatagagatgatagaagtaaagtgcgttataatgaaacatctacagag
aaatctcatgttgatgatcgatttcatgggcagaacttgccgccacccccgccattacct
cctcacatggtcccacagtcagtgaatgcaggtagaagagatgacgatgctgacagaagg
tttggaactgctagacattctcaaaggctttcgccgaggcatgaagagagagaacggaga
agatctgaggagaatgcctttgtttcacaggatgatgcaaaacgcagaagagaagaagat
tttagagatagaaagcgggaagaaagggatgggctatcagtgaaggtggaggagagggag
agggagagggagagggagaaaacaagccttttgaaggaggacatagatgcaaatgctgcc
tctaaaagacgaaaactcaaaagggagcatctgcctgagcctggcgagtattcacccgcg
gccccaccacctcctcccttaaatattgcaatgtcacaaccatatgatggaagagacagg
gtagacagaaaaggggccattgtccagtgtccaggttacttggaggaaccaggtatgcgg
attcatggtaaagaagcaaccagcaagattgctcgtcgtgatactgaacagatgtacgac
agagagtgggatgatgagaagaggcagcgagctgaaccaaagagacggcaccgcaagtaa

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