Actinidia eriantha (wild kiwifruit): 130765717
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Entry
130765717 CDS
T09464
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130765717
09122 Translation
03013 Nucleocytoplasmic transport
130765717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130765717
03041 Spliceosome [BR:
aew03041
]
130765717
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
130765717
Spliceosome [BR:
aew03041
]
Complex C
Other components
EJC/TREX
130765717
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
130765717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
LIM_bind
YkyA
FapA
FlxA
Motif
Other DBs
NCBI-GeneID:
130765717
NCBI-ProteinID:
XP_057478199
LinkDB
All DBs
Position
25:6198130..6249461
Genome browser
AA seq
1799 aa
AA seq
DB search
MTGEHRARLIKLAKWLVESAIVPLRLFQERCEEEFLWESEMIKIKAADLKSKEVRVNTRL
LYQQTKFNLLREESEGYAKLVTLLRQGSEASTQNTSAATVGIIKSLIGHFDLDPNRVFDI
VLECFELQPSNSVFLDLIPIFPKSHASQILGFKFQYYQRMEVNHSVPFGLYQLTALLVKE
DFIDLDSIYSHLLPKDDEAFEHYNAFSAKRFDEANKIGKINLAATGKDLMDDEKQGDVTI
DLFSALDIESEAVTERASELENNQTLGLLTGFLSVNDWYHAHILFDRLSPLNPAEHSQIC
NELFRLIEKSLSSANELIRQTQIQILALPSAAGSDSMETNSYVYRSFVNLPKELFEMLSC
AGPYLYRDTLLLQKVCRVLRGYYQSAIDLVSAGDGSFNPGSGIGGNQTPRLHLKEARLRI
EEALGTCLLPSLQLTPANPAVGQEIWEVMNLLPYEGRYRLYGEWEKDDERIPMVLSARQT
AKLDTRRILKRLAKENLKQLGRMVAKLSHANPMTVLRTIVHQIEAYRDMITPVVDAFKYL
TQLEYDILEYVVIERLAQGGREKLKDDGLNLSDWLQSLASFWGHLCKKYPSMELRGLFQY
LVNQLKKGNGIELVLLQELIQQMANVQYTENMTEEQLDAMAGSDTLRYQATSFGITRNNK
ALIKSTNRLRDSLLPKEEPKLAIPLLLLIAQHRSVVVINANVPYIKMVSEQFDRCHGTLL
QYVDFLCSAVAPTSAYAQLIPPLEDLVHLYHLDPEVAFLIYRPVMRLFKCQSSSDVFWPL
DDVAAPKTSIAEKDSEQADSSAKLVLDLGPSWKPITWSNLLDTVSTMLPSKAWNSLSPDL
YATFWGLTLYDLYVPRSRYESEISKQHTALKALEELSDNSSSAITKRKKDKERIQESLDR
LTSELQKHEENVASVRRRIAREKDKWLSSCPDTLKINMEFLQRCIFPRCTFSMPDAVYCA
MFVHTLHSLGTPFFNTVNHIDVLICKTLQPMICCCTEYEAGRLGRFLHETLKIAYYWKSD
ESIYERECGNMPGFAVYYRYPNSQRVTYSQFIKVHWKWSQRITKLLIQCLESTEYMEIRN
ALLLLTKISSVFPVTRKSGINLEKRVAKIKSDEREDLKVLATGVAAALAARKPSWITEEE
FGMGYLELKPAPSLASKSLASNLVSVQNGSGINVQSEPAGGRVVGTGDQMLITKTADGRV
DRTESASLKSETGHVKLKGSSLVNGSDGQASLPSASVQAGASKSIENQKLMGDATNQTFD
EDVTKVGSKTSTESEVRASVKRSLPAGSVSKQPRQDLSKDDNKSGKAVGRTSGSFSTIER
DLVHPLEGRLGGTANVSSPGAATGSTLPTSVKSSTQSAKSLDIHSGEPKVESVVAKSSDL
RASAIKDDSTDVSDVQRPPSSRPVHSPRTDNSIIASKSGDKPHKRASPAEEPDRLNKRRK
GETDSRDLDGDVRFSDRERSIDPRLADKHLPVDLDKLASDEQTVNRLTDKHLDRSKDKGT
ERYDRDYRERLERPEKSRADDNMLEKSRDRSMERHGRERSVEKGQDRGSDRGFDRLTEKS
KDERNRDDRSKVRYNETSTEKSHVDDRFHGQNLPPPPPLPPHMVPQSVNAGRRDDDADRR
FGTARHSQRLSPRHEERERRRSEENAFVSQDDAKRRREEDFRDRKREERDGLSVKVEERE
REREREKTSLLKEDIDANAASKRRKLKREHLPEPGEYSPAAPPPPPLNIAMSQPYDGRDR
VDRKGAIVQCPGYLEEPGMRIHGKEATSKIARRDTEQMYDREWDDEKRQRAEPKRRHRK
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgacgggagagcatcgcgctcgactcattaaattggcaaaatggctggtggaatctgca
atagtcccactaaggctttttcaggagcgttgtgaggaagaatttttgtgggaatctgaa
atgatcaagataaaggctgcagatttaaagtctaaagaggtcagagtaaacacacgtttg
ctttatcaacaaacaaaatttaaccttcttcgggaagagagtgagggttatgccaagctg
gttacactccttcgtcaaggttctgaagcatcaacacaaaatacgtcagcagcgacagtt
ggcataattaagtcgctgatcggacattttgatctggatccgaatcgtgtgtttgatatt
gtattggagtgtttcgaacttcagcctagtaacagcgttttcttggatctgattcctatt
tttcccaagtctcatgcttcccagattcttggtttcaagtttcaatattatcagcgtatg
gaagtgaatcactctgtaccatttgggctctatcagctgacagctctactggtgaaggaa
gatttcattgatcttgatagcatatattcacatttacttcccaaggatgacgaggcattt
gagcattataatgccttttctgctaagcgatttgatgaggctaataaaattggtaaaata
aatctagctgccactggaaaggatcttatggatgatgagaagcaaggagatgtgacaata
gatcttttttctgctctagacattgaaagtgaagccgtaactgaacgagcttcagagctt
gaaaataatcaaactctgggtttgcttactggatttctttcagtgaatgactggtatcat
gcccatatactttttgatcgtctttcacctcttaatccggcggagcatagtcaaatttgt
aacgaattgtttaggctcattgaaaaatctctctcttcagccaatgaacttattcgtcaa
acacagattcagattttggcgttgccttcagcagctggtagtgattcaatggaaacaaat
tcatacgtctatagatccttcgttaatcttccaaaagagctttttgagatgctctcttgt
gctggaccttatctttaccgtgatacattgctgctgcagaaggtatgtagagtattaaga
ggctattaccagtctgcaattgaccttgtcagtgccggtgatggatcttttaatcctgga
agtggtattggtggaaatcaaactcctcgtctgcacctgaaggaagccaggttaaggatt
gaagaagccctgggaacatgcctacttccttctttacaattgacacctgcaaatccagcc
gttgggcaggagatatgggaagttatgaatctccttccatacgaggggcgatatcgtttg
tacggtgaatgggaaaaagatgatgagcggattccaatggttttatcggctaggcaaaca
gcaaagctagatactagaaggatcttgaaacggcttgcaaaggaaaacctaaagcagctg
ggtcgaatggttgctaaactatctcatgccaatcccatgacagtgcttcgaacaattgtt
catcagatagaggcatacagggatatgattactcctgtggtggatgcattcaagtacttg
acacagcttgagtatgatattttggagtatgttgtgattgagcgcttggcacaaggtggg
cgcgagaagcttaaagatgacggccttaatttgtcggactggcttcaatccctggcttcg
ttttggggtcacttgtgcaaaaaatacccatcaatggaactgagaggtcttttccagtat
ctcgtgaatcaattgaaaaaagggaatggaattgaacttgttctcctgcaggagcttatc
cagcaaatggcaaatgtccaatacactgaaaatatgactgaggaacagttggatgccatg
gcagggagtgacactctccggtatcaggctacttcttttgggataacccgaaacaacaag
gcattgatcaaatccactaacaggctaagggactcattgcttccaaaggaggaaccaaaa
ttagcaattccgctgttgttacttattgcccaacatcgttctgtggttgtcataaatgca
aatgtgccatatattaagatggttagcgagcagttcgatagatgccacggaaccctcctt
caatatgtggacttcctgtgtagtgcagtggcgccaacatcagcatacgctcagctgatt
ccccctcttgaggatcttgtgcacctttatcatcttgatcccgaggtggccttcttaatt
tatcgacctgtgatgaggctcttcaaatgtcagagtagttctgatgtcttctggccttta
gatgatgttgcagctccaaagacctcaattgcagaaaaggattctgaacaagcagattca
tctgccaaattggttctggatcttggtccttcttggaagcctataacgtggtcaaatctt
cttgatactgttagtacaatgttgccttcaaaggcatggaacagcctctctccagacctg
tatgctactttttggggtcttacactatatgatctttatgttcctagaagccgttatgag
tctgaaatttccaagcagcatactgctcttaaagctctagaggaactctctgataattca
agctctgcaatcacaaaaaggaagaaagacaaggaaagaatacaagaatccttggatcgt
cttactagtgaactccagaagcatgaagaaaatgttgcatctgttcgtagacggattgct
cgtgagaaggataagtggttgagctcctgcccagataccttaaagattaacatggagttc
cttcaacgctgtattttcccacgatgtactttcagtatgcctgatgctgtttattgcgcc
atgtttgtacatactcttcattctctaggcacaccgtttttcaacacagtcaaccacatt
gatgttctgatatgtaaaaccttgcaacctatgatatgctgttgcactgagtatgaagcg
ggtcgacttgggaggtttttacacgagacattgaagattgcatactactggaagagtgat
gaatcaatatatgaacgggagtgtggaaatatgccaggttttgccgtctattataggtat
ccaaacagccagcgtgtcacttatagtcagtttattaaggtgcactggaaatggagtcag
aggatcacaaagttgctgattcaatgtctggaatccaccgagtacatggaaatccgaaat
gctcttttactgttgacaaaaatttctagtgtttttcctgtcactcgaaagagtggcata
aaccttgaaaaacgggttgctaaaattaaaagtgacgaaagagaggatctcaaggtgttg
gctacaggagttgctgcagccttggctgctaggaagccttcatggattacagaagaagaa
tttggcatgggttatcttgaactcaagcctgccccttcgcttgcttcaaaatctttagct
agtaatttagtttctgtacaaaatggttctggcattaatgtccaaagtgaacctgctgga
ggaagagttgttggcacaggggaccagatgttaataacaaaaactgcggatgggagggtt
gacagaacagaaagtgcttcactaaaatctgagactggacatgtaaaacttaaaggtagc
tcattagttaatggctcagatggtcaggcttctctgccgtctgcttctgtacaagctgga
gcatccaaatccattgaaaatcagaaactgatgggtgatgccacaaaccaaacattcgat
gaggatgtcaccaaagttggatcaaagacatcgacagaatcagaggtaagagcttctgta
aaaaggtcattgcctgctgggtctgtttcaaagcaacccaggcaggaccttagtaaagat
gataacaagtccggaaaagctgttggcagaacatcaggctctttttctaccattgagagg
gatctcgtgcatccacttgaagggaggctaggtgggacagctaatgtttcttctccagga
gctgccactggcagtacacttccaacttcagttaaaagctctactcaatcagcgaaatcg
cttgatatccatagcggtgaaccaaaggtagagagtgtagttgcgaagtcttctgatttg
agggcctctgctataaaagatgatagcactgatgtttctgatgtgcaaagacccccatct
tccagacctgttcattctcctagaactgataattccattatagcttcaaaatctggcgat
aaacctcacaagagagccagccctgctgaagaaccggaccgactaaataagcgtcggaaa
ggggaaactgattcaagagatttagatggtgatgttagattctctgatagagagaggtca
attgatccgcgattagcggataaacatcttccagttgatcttgacaaattagcatcagat
gagcaaactgttaataggcttacagataagcacttggacagatccaaagataaggggacc
gagagatatgacagggactacagggaaaggttagagcgtcctgaaaagtcccgtgcagat
gacaatatgttggaaaaatcaagagataggtcaatggaaaggcatgggagagaacgttct
gtagaaaaggggcaagacagaggttctgataggggttttgataggcttacagaaaaatct
aaggatgaaagaaatagagatgatagaagtaaagtgcgttataatgaaacatctacagag
aaatctcatgttgatgatcgatttcatgggcagaacttgccgccacccccgccattacct
cctcacatggtcccacagtcagtgaatgcaggtagaagagatgacgatgctgacagaagg
tttggaactgctagacattctcaaaggctttcgccgaggcatgaagagagagaacggaga
agatctgaggagaatgcctttgtttcacaggatgatgcaaaacgcagaagagaagaagat
tttagagatagaaagcgggaagaaagggatgggctatcagtgaaggtggaggagagggag
agggagagggagagggagaaaacaagccttttgaaggaggacatagatgcaaatgctgcc
tctaaaagacgaaaactcaaaagggagcatctgcctgagcctggcgagtattcacccgcg
gccccaccacctcctcccttaaatattgcaatgtcacaaccatatgatggaagagacagg
gtagacagaaaaggggccattgtccagtgtccaggttacttggaggaaccaggtatgcgg
attcatggtaaagaagcaaccagcaagattgctcgtcgtgatactgaacagatgtacgac
agagagtgggatgatgagaagaggcagcgagctgaaccaaagagacggcaccgcaagtaa
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integrated database retrieval system