Actinidia eriantha (wild kiwifruit): 130766232
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Entry
130766232 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like
KO
K07466
replication factor A1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
aew03440
Homologous recombination
aew03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130766232
03420 Nucleotide excision repair
130766232
03430 Mismatch repair
130766232
03440 Homologous recombination
130766232
03460 Fanconi anemia pathway
130766232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aew03000
]
130766232
03032 DNA replication proteins [BR:
aew03032
]
130766232
03400 DNA repair and recombination proteins [BR:
aew03400
]
130766232
Transcription factors [BR:
aew03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130766232
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130766232
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130766232
MMR (mismatch excision repair)
130766232
DSBR (double strand breaks repair)
HR (homologous recombination)
130766232
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
zf-CCHC
DUF223
DUF8448
CDC24_OB3
zf-CCHC_3
CORD_N
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
130766232
NCBI-ProteinID:
XP_057478908
LinkDB
All DBs
Position
25:15214083..15219986
Genome browser
AA seq
868 aa
AA seq
DB search
MAVNLTEGVIAMLSNGDAQGAADLKPVLQVADLRLVNAQNPNPSNERYRILLSDGVHLQQ
GMLATQKNDLIRTHSLQKGSIVQLTQFVCNVIQGRTIIIIIDLNVILDKCDPIGVPKQLE
RPGTMTGSAPVASSAGQGQSTMDQPGIVTGNPSSYVGGPLGGSVAKPNAPGGTLPNQPNM
YRSTDPHSYGGTYVSNPDPGRYNATNPNMYSKTEVGGGMSRAPNTYGRPQSAYQQPPPMY
TNRGPVAKNEAPPRIIPIAALNPYQGRWTIKARVTAKGELRHYNNPRGEGKVFSFDLLDS
DGGEIRVTCFNVVADQFYNQIEAGKVYLISKGSLRPAQKAFNHLRNDHEIMLDSTSTVQP
CYEDDNSIPRQQFHFRPIIDVESMENNSIVDVIGVVSFVSPSTSIMRKNGTETQKRAIHL
KDMSGRSVELTLWGNFCNAEGLQVQQMCDSGVFPVLAVKSGRVNEFNGKAVGTISTSQLI
IEPDFPEVHRLKEWFEKEGRNTPSVSISRETTTIGRTDVRKTVSQIKDEKLGTSEKPDWI
TISATISFMKVDTFCYTACPIMIGDRQCNKKVTNNGDGKWRCDRCDQSVDECDYRYILQF
QIQDHTGLTWVTAFQESGEDIMGISAKELYYLKFEERDDERFGEIVQKVLFNKYVFKLKV
KEETFSDEQRVKSTVVKAEKVNFSSESRFLLDLVCKLKGENLSSLAPKTESVFPNSGVTS
TGSGSFGVGQSAPPVVNYVGSTSNAGAEVGLPANQVGPYGNQYSSRVTSSGPTGMYMSCN
SCGGTGHSSTNCPSFLSGREQSYGHGFANRASAGKAVGGVSGECFKCHQTGHWARDCXGL
SNVPLAYGSSNVTPGRYGGVSNQRIGGF
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgaatttgacggaaggagtgatagcgatgctgtcgaacggggacgcgcaaggc
gcggcggacctgaagccggtgctgcaggtggcggacctgaggctggtgaacgcgcagaac
ccaaaccccagcaacgagaggtaccggatcctgctctccgacggcgtccatcttcagcag
ggcatgctcgccacgcagaagaacgacttgatccgaactcacagtttgcagaagggctcc
attgttcagttgactcagttcgtctgtaatgtcatccaaggccgcacgattattattatc
atcgacctgaatgtgatacttgataagtgtgatcctataggcgtaccgaaacaattagag
cgacctggcaccatgactggttctgcgccagtggcaagctctgctggacaggggcagtct
actatggatcagcctggaatagtaactggtaatccatcatcttatgttggtggtccactg
ggtggctcagttgctaaaccaaatgcacctgggggaactcttccaaaccaacctaatatg
tatcgaagcacagatccacattcctatggtggtacctatgtcagcaatccggaccctgga
cgatataatgctacaaatcccaatatgtactccaaaacagaggttggtggtggtatgtca
cgggctccgaatacttatgggcggcctcagtcagcatatcaacagccacctccaatgtac
acaaacaggggacctgtagctaagaatgaagctcctcctaggattataccaattgctgct
ttgaatccatatcagggaaggtggacaattaaggccagagtgacagcaaaaggggagctt
agacactacaacaatcctcggggggagggtaaagtattctcttttgatcttcttgattct
gatggtggagaaattcgagtgacctgctttaatgttgttgctgatcaattctacaaccaa
attgaggctggtaaggtatatttgatttccaagggaagcctgagacctgctcagaaggct
ttcaatcatcttcgtaatgatcatgaaattatgcttgacagtacatcaacagtgcagcct
tgctatgaggatgacaactcaattccacgacaacaatttcatttccgtcctataatcgat
gttgagagcatggagaacaacagtattgtggatgtgattggtgtggtttctttcgtcagt
ccgtctacttcaataatgagaaaaaatggtactgaaactcaaaaaagggccatccacttg
aaggacatgtctgggcgaagtgttgaattaactttatgggggaatttctgcaacgcagaa
ggacttcaagtgcaacagatgtgtgattctggggtgtttcctgttttggctgtgaaatct
ggtagagtcaatgagttcaatgggaaggctgtgggaaccatatctacaagccagttgatc
atagagccagatttcccagaggttcacaggctaaaggaatggtttgagaaggagggaagg
aacaccccatctgtctctatatccagggagacgacaactataggaagaacagatgtccga
aaaactgtatcccagatcaaagatgagaaactagggacttctgaaaagccagactggatt
acaataagtgcgaccatctcgttcatgaaagttgacacattttgctatacagcatgtccc
atcatgattggcgatcgacaatgcaacaaaaaggttacgaacaatggagacgggaaatgg
cggtgtgataggtgcgatcaatctgttgatgagtgtgattataggtatattctccagttt
cagatacaagaccacactggtttgacttgggtaacggcatttcaggaatctggtgaggac
atcatgggtatatccgcaaaagaattgtattatttgaaattcgaggagcgggatgatgaa
agatttggtgaaattgtgcagaaagtattgtttaacaagtacgttttcaagttgaaagtg
aaggaagaaactttcagtgatgaacagcgtgtgaagtccacagtggtcaaagcagagaag
gttaatttctcgtccgagtccaggtttcttctggatttggtgtgtaagcttaaaggagag
aatctcagttctctagccccaaagacagaaagcgtctttccaaacagtggagtaactagt
acaggatctggaagctttggagttgggcaatctgcaccaccagtcgtcaattatgtggga
agtactagcaatgctggtgcagaagttgggctaccagcaaatcaagtgggtccgtacggg
aaccaatacagttctagggttacttcaagtgggcccactggtatgtatatgagctgcaac
agctgtggtggtacagggcacagctctacaaactgcccaagttttctgagtggtcgggaa
caatcatatggacatggttttgctaatagggcgtctgccgggaaagcagttggcggtgta
tccggtgagtgctttaaatgccatcaaactggtcactgggcgagagattgtncaggtttg
agcaatgttcctctggcttatggaagcagcaatgttacacctggaagatacggtggtgta
tcaaatcaacggattggcggcttctga
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