Actinidia eriantha (wild kiwifruit): 130766505
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Entry
130766505 CDS
T09464
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04120
Ubiquitin mediated proteolysis
aew04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130766505
04120 Ubiquitin mediated proteolysis
130766505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aew04121
]
130766505
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130766505
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130766505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
FlxA
zf-ANAPC11
SPX
zf-RING_5
zf-RING_16
zf-RING_11
C1ORF64
Prok-RING_4
zf-HC5HC2H
zf_RING_Vps8
zf-RING-like
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
130766505
NCBI-ProteinID:
XP_057479160
LinkDB
All DBs
Position
3:7636707..7646630
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AA seq
555 aa
AA seq
DB search
MMRLQTYAGISLVATLVVIYHAFHSRGQFYPAMVHLSTSKISLVLLLNMGLVIMFILWQI
IKRVFLGSLREAEIERLNEQSWREVMEILFAITIFRQDFSVAFLAMVTALLLIKALHWLA
QKRVEYIETTPSVTTLSHIRIVSFMGFLLLIDSLFLYSSIKYLIQTRQASVSFFFSFEYM
ILATTIVATFIKYVFYVSDMLLEGQWERKPVYTFYLELVRDLLHLSMYLCFFFVIFVNYG
VPLHLIRDLYETFRNFRVRVADYVRYRKITSNMNDRFPDATHEELNASDATCIICREEMT
TAKRLSCGHLFHVHCLRSWLERQHTCPTCRALVAPPENGTTTFGSQASPHQQGAGIASTP
HQSSTGDGVANDIVRQHQARLQAAAAAASIYERSFVYPSINTSAWSPGYALLPQAYRPLD
GTVNADSSGERSFDGQSQQHPSAIPVGPANLATPQSSYSSFVTFFAPDSDVNYGERFDSN
LNIQDSQLEAQKKIIQNQIENLQNQLHLLQKSRTERSMDVSATSPSDCKGKAVASSSSSV
SDCIQHGETEERENR
NT seq
1668 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggttacaaacgtatgcgggaattagtttggtagcgacactggtggttatctat
catgcgtttcacagtagaggccagttctacccagcaatggttcacttatctacttccaag
atcagtttggtgcttcttctcaatatgggtcttgtcattatgtttatcttgtggcaaatt
atcaaacgggtcttcctcggatctctccgtgaggccgagattgagaggctgaatgagcag
tcatggagggaagtcatggaaatacttttcgcaattaccatttttcggcaggacttttcc
gttgcgtttcttgcaatggtgactgctcttttgttaattaaagctctgcattggttggct
cagaaaagggtcgagtacattgaaacaaccccgtcggttactacattgtctcacatccga
attgtttctttcatgggatttcttctcctcatagatagtctattcttgtacagttctata
aaatacttgatacaaacccggcaggcttcagtttctttcttcttttcattcgagtatatg
attctggcgacgacaatagttgcaacatttattaagtatgttttctatgtcagtgacatg
cttctggaaggacaatgggaaagaaaaccagtctacaccttttatttggagcttgtgcgg
gacttgctgcatttgtctatgtatctttgcttcttctttgtgatattcgtgaattatggt
gtgcctctgcacttgattcgcgacctttatgagacatttcgcaactttagagttcgtgtt
gcggattacgttcgttaccggaagataacttcgaacatgaatgatcgttttccagatgca
acgcatgaagagctgaatgcgagtgatgcaacctgcataatttgtcgagaggagatgact
actgcaaagagactaagttgcggacatctgtttcacgtgcactgcctccgctcatggtta
gagcggcagcacacatgtcctacttgcagagcccttgttgcaccacctgaaaatgggact
actacttttggatcacaagcaagtcctcatcaacaaggagcaggtatagcaagtacgcct
catcaaagttcaactggagatggtgtggcaaatgatattgttaggcagcatcaggcaaga
ctccaagcagctgctgctgccgcctcaatatatgagagatcttttgtgtatccttctatt
aacacatcagcgtggtcccctggatatgctttacttcctcaagcatatagacctctggat
ggtactgttaacgcagactctagtggagaacgatctttcgatggacaatctcaacagcat
ccatctgcaatcccagttggacctgccaacttggccactcctcagagttcatacagtagt
tttgtcaccttttttgctcctgattcagatgtgaactatggagagagatttgacagcaat
ctaaatatacaagactctcaattggaggcccagaaaaaaattattcaaaaccagattgag
aacttgcaaaaccagctccaccttctacagaagtcgagaactgagagaagcatggacgtt
agtgcaacatcaccttccgactgtaagggaaaggcagttgcatcatcgtcttcatctgtt
tcagactgcattcaacatggggagactgaagagcgagagaacaggtaa
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