Actinidia eriantha (wild kiwifruit): 130766741
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Entry
130766741 CDS
T09464
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130766741
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130766741
03009 Ribosome biogenesis [BR:
aew03009
]
130766741
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
130766741
Spliceosome [BR:
aew03041
]
Complex A
U1 snRNP components
U1 related factors
130766741
Complex B
130766741
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
Helicases
130766741
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
130766741
NCBI-ProteinID:
XP_057479416
LinkDB
All DBs
Position
26:complement(10977443..10983179)
Genome browser
AA seq
723 aa
AA seq
DB search
MMNHFDQRYGDPQSYRPRRSDLMGPHPLAVPPMMGGGMGGAVPTYGHGGAAPYGGPRVPY
AAGERDTGGGAGSAPGVGGFNGYPPFQPDVGRGFDIGRGGGDGDGDGGGGGRGFSDGRGG
GRGRGGGDLGGRMANGGVGNRRGGDGGFGGGGRGREVGRGGGGGERGFDSGRGGGRAGGG
RGVGGSSYGGKSGVRSFGGGRAGGRGYDAGRGGGRSFGGGRGMGFDGGRGGGRGGGRHGG
ARGDLDNIALPKQDFGNLVPFEKNFYIECPSVRAMSEQDVMLYRSRREITVEGQDVPRPI
RIFEEANFPDYCLEVIARLGFVEPTPIQSQGWPMALKGRDLIGIAETGSGKTLAYLLPAF
VHVSAQPRLVQGEGPIVLVLAPTRELAVQIQEEALKFGSHTNIRSTCIYGGAPKGPQIRD
LRRGVEIVIATPGRLIDMLEAQNTNLKRVTYLVLDEADRMLDMGFEPQIRKIVAQIRPDR
QTLYWSATWPLEVETLARQFLRNPYKVIIGSADLKANQSINQVVEVVKEVEKYNRLIRLL
KEAMDGSRILIFMETKKGCDQVTRQLRMDGWPALSIHGDKNQAERDWVLAEFKSGRSPIM
TATDVAARGLDVKDIKCVINYDFPSSLEDYVHRIGRTGRAGATGIAVSFFTHANAKFARD
LIKILQEAGQIVPPPLSNMARSAGSSLGASGGNFRSRGRRGFGNRSLISGSNTIPLGGSQ
RHW
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaccattttgaccagagatatggcgaccctcaatcctaccgccctcgtcgaagt
gacctaatggggccacacccgctggctgttccacctatgatgggtggtggaatgggtggg
gcggtgcccacctacggccatggcggtgctgctccgtatggtggccctagggttccttac
gctgccggtgaaagagataccggcggtggtgcaggatctgcacctggtgttggtggtttt
aatgggtacccgccttttcagcctgatgttggaagagggtttgacatcggccgcggtggt
ggtgatggtgatggtgatggaggaggtgggggaaggggatttagtgatgggagaggagga
gggaggggaaggggtggtggtgatcttggtggaagaatggccaatggtggagtggggaat
agaagaggaggtgatggaggttttggcggtggtggaaggggtcgtgaggttgggcgaggt
ggtggtggaggcgagagaggatttgattctggtcgtgggggaggtagggctggtggtggg
cgtggggttggtgggagttcttatggaggtaaaagtggtgttagaagttttggtggaggt
agagccggaggtaggggttatgatgcaggccgtggtggtggtaggagctttggtggcggg
cgcggaatggggtttgacggaggccgtggtggcggcagaggtggtggtagacatggtgga
gcaagaggagacttggataatattgctcttccaaagcaagattttggtaacttggttcct
tttgagaagaacttttacattgaatgtccttctgtgagagcaatgtctgagcaagacgtt
atgctttaccgttcaagacgtgaaatcactgttgaaggccaggacgttccaaggccaatt
cggatttttgaggaggcaaattttcctgattattgcctcgaggttattgccagattgggc
tttgttgagccaacaccaattcagtctcaaggatggccgatggccttgaagggaagggat
ttaattggcattgctgagacaggttctggaaagactttggcatatctgctacctgctttc
gttcatgttagtgcacagcctcgattggtacaaggcgaaggtcccattgtcctggtatta
gcacctactagagaattggctgttcaaattcaggaagaagctttgaaatttgggtcacat
acaaatattagaagtacctgcatctacggtggagcacccaaaggaccacagattcgtgat
cttcgacgaggtgttgaaattgttattgccacacccggtcgactcattgatatgttagaa
gctcaaaacacaaacttgaaaagagtgacctaccttgtgttggatgaggctgatcgaatg
ttggacatgggctttgagcctcagatcaggaaaattgttgcccagatccgaccagataga
caaacattgtattggagtgcaacatggccactggaggtggaaactctggcaaggcagttt
ttacgcaacccatataaggtaattattggctccgcagatcttaaggcaaaccaatctatt
aatcaagttgtggaagttgtaaaagaggtggagaaatacaacaggctgatcagacttctc
aaggaagcaatggatggaagtcgaatactgattttcatggagacaaaaaaaggatgtgac
caagtcactaggcagttgagaatggacggatggccagctttatccatccacggtgataaa
aaccaggccgaaagagattgggtcctggctgagttcaaaagtggcaggagtcctataatg
actgccactgatgttgctgcacgtggtcttgatgtgaaagacataaaatgtgtgatcaat
tatgatttcccgtcaagtctggaggattatgtccatagaatcggccgaacaggtcgtgca
ggagctacgggaattgctgtttcatttttcacacatgcaaatgctaagtttgctcgagat
ctcattaagatcctgcaagaagcggggcaaatagttcctcctccattgtctaacatggct
cgttctgctggttcaagtctaggagcttctggtggcaacttccgatccagaggacgacgt
ggctttggcaacaggagtttgatttcaggttctaacactattcctcttggtggttcccag
aggcattggtag
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