Actinidia eriantha (wild kiwifruit): 130766773
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Entry
130766773 CDS
T09464
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit B-like
KO
K07466
replication factor A1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
aew03440
Homologous recombination
aew03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130766773
03420 Nucleotide excision repair
130766773
03430 Mismatch repair
130766773
03440 Homologous recombination
130766773
03460 Fanconi anemia pathway
130766773
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aew03000
]
130766773
03032 DNA replication proteins [BR:
aew03032
]
130766773
03400 DNA repair and recombination proteins [BR:
aew03400
]
130766773
Transcription factors [BR:
aew03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
130766773
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
130766773
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
130766773
MMR (mismatch excision repair)
130766773
DSBR (double strand breaks repair)
HR (homologous recombination)
130766773
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
Rhabdo_glycop_CD
Motif
Other DBs
NCBI-GeneID:
130766773
NCBI-ProteinID:
XP_057479453
LinkDB
All DBs
Position
26:complement(6344390..6348790)
Genome browser
AA seq
637 aa
AA seq
DB search
MHCTQFIREREMAKRVSPDAISSLLANPSPDSSSEVREIVVQVLDLKPTGSKYMFTASDG
KMKLKALLQSSLSSEVLSGNIQNLGLIRILDYTVNDIPTKSEKFLIVIKCEVVSAALEAE
VKADGKIEESGIILKPKQEMDIKSEVKNDTLGIILKPKQEVVAKSAAQIMHEQNGNMAPA
ARLAMTRRVHPLVSLNPYQGNWTIKVRVTSKGNMRTYKNARGEGCVFNVELTDEDGTQIQ
ATMFNEAARKFYDKFQLGKVYYISKGTLKVANKQFMTVHNDYEMTLNENSEVEEASNEAA
FIPETKFNFVPIDQLCPYVNSKELVDVIGVVQNVSPTMSIRRKINNETIPKRDITIADET
KKTVVVSLWNDLATNVGQELLDISDKSPIVAIKSLKVGDFQGVTLSALSKSIVVVNPETP
ESKKLRSWYDAEGKEASLASVGAGMSPTTNSGGRSMYSDRVLLSHITGNPSLGEDKPVFF
SIRAYISLIKPDQSMWYRACKTCNKKVTEVIGSGYCCEVCQKYDNECSLRYIMVTKVSDA
SGEAWVSAFNEQAEKIIGCSADELDKLKSQQEGKTNPFELKLKTATWVPHLFRVSVTVNE
YNSEKRQRITVRAVAPIDFAAESRFLLEDISKMKTSQ
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcattgcacacaattcattcgagagagagagatggcgaaacgagtaagcccagatgcg
atttcaagcctactggcgaatccatctccggattcttcatcggaagttagggaaatcgtt
gttcaagtcctcgatctgaagcctactggaagtaaatacatgttcactgctagtgatggg
aagatgaagctcaaagcactattgcaatctagtttgtcatcagaagtcctgtcgggaaat
attcagaacctgggtctcattcgcattcttgattatactgttaatgacattccaacaaag
agtgagaagtttttaatcgtcatcaagtgtgaggttgtatctgctgctcttgaagcagag
gtcaaagctgatgggaaaattgaagaatctgggattattctgaaaccaaaacaggaaatg
gatattaagagtgaggtgaaaaatgatacgctgggcataattttgaagccaaagcaagaa
gtggttgctaaatcagctgctcagataatgcatgaacagaatggaaacatggcacctgct
gcacggctggcgatgactagaagagttcatccacttgtttccttgaatccttaccaagga
aactggaccataaaggtccgagttactagcaaaggaaacatgaggacatacaaaaatgct
agaggagaaggctgtgtcttcaatgtggagttgacagatgaagatggtacgcaaatacaa
gcaacaatgtttaatgaagctgcaaggaagttctatgacaagtttcagctggggaaggtt
tattacatatcaaagggaacactaaaagttgctaataagcagttcatgacagtacacaat
gactatgaaatgactttgaatgaaaattctgaggtggaggaagcaagtaatgaagcagct
tttattcctgagacaaaattcaattttgtcccgattgatcaattgtgtccatatgtcaat
tcaaaggagcttgtcgatgttattggtgtggttcaaaatgtatctcctacaatgagcatt
cgaagaaaaattaacaatgagactataccgaaacgtgacataactattgcagatgagacg
aagaaaacagttgtggtgtctctatggaatgatcttgcaacaaatgttggacaagaactg
ctggatatttctgacaagtctcctatagttgcaattaaatccctcaaagttggagacttc
caaggtgtaactttgtcagccttgagcaagagcattgtagtagtaaatccagagacaccc
gaatcaaaaaagttgagatcctggtatgatgctgaaggtaaagaagcttcactggcttct
gttggtgctggaatgagccccacaaccaacagtggagggagatccatgtactctgaccgt
gtcttgctttctcacataactggcaacccgtccttgggcgaggacaagcctgtattcttc
agcataagagcatacattagcctcatcaaacctgaccaatctatgtggtatcgtgcttgt
aagacgtgcaacaagaaagttactgaagttattggatccgggtattgttgtgaagtatgc
caaaagtatgacaacgagtgcagtttaagatacataatggtaacgaaagtatccgatgca
agtggcgaagcttgggtttcggcgttcaatgaacaagcagagaaaattatagggtgctct
gccgatgagctagataaacttaaatcccagcaggagggaaaaacaaatcctttcgaattg
aaactgaaaacagcaacatgggttcctcatcttttccgagtcagcgttacagtgaacgag
tacaatagtgagaaaaggcagaggataacagttagagcggttgccccaattgattttgca
gctgagtccaggtttttgctggaggacatatcaaagatgaaaacctctcaatag
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