Actinidia eriantha (wild kiwifruit): 130767016
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Entry
130767016 CDS
T09464
Name
(RefSeq) protein ROOT INITIATION DEFECTIVE 3-like
KO
K14829
pre-rRNA-processing protein IPI3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aew03009
]
130767016
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
130767016
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Beta-prop_TEP1_C
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_CAF1B_HIR1
NBCH_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_IP5PC_F
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_IFT122_1st
PROPPIN
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_HPS5
FBA
TPPII_GBD
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
130767016
NCBI-ProteinID:
XP_057479748
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Position
26:complement(11693671..11697513)
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AA seq
473 aa
AA seq
DB search
MGGKEALAVCSDKSLSIGITIEDIDSGAHLLHIPTSASPSHGLTCLASQCLVASQIHRQG
SVAGGVIFIWPLNKPQAPIRSYPTEPIGPVACTRDGIFLVGGAPSGNAYVWEVSSGRLLR
TWCAHHKSLTCLTFSGDDSFLISGSEDGTIIVWPMIGLLDETDRWNLPSVLTFSSEHSSS
ITGVLTTSSSSSSVLMSSSLDGTCKVWDLVTGRLLQTQVFPLPMTAIVLDPAEKTLFCGS
ADGRIFMNTLDIGLVEEASIVSEDEPMVLKGHNGSITALTFCGLGLISASEDCTACLWDV
VNCVIIRRFNHLKGPITNLVVIPQSSLLPSMNHHRAPNQFRVSILDKYPKPPDVSNGVLT
LLPSHSPLEDHCVASEYRSTNLLKQQFLDLEKEGTFASMQMKAETSIESQAWAMRMTKHV
MQMNKHLQSRLLDMMQRRLLQQPPNASSSTNNRKRKKTNGGSLPLQGEEQPQS
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atggggggcaaggaggcattggcagtgtgcagtgacaagagcttgagcataggaataaca
attgaggacatagacagtggggcccatctcctccacatacccacctctgcctcaccttct
catggtctgacctgtttggcaagtcagtgccttgtggcctctcagatacacaggcagggc
tcagttgctggtggggtcatcttcatatggccattgaataagcctcaagcacccatccgg
agctacccaacagagcccatcgggccagtcgcatgcacaagggatggcatatttcttgtt
ggcggagctccttcgggaaatgcttatgtttgggaggtctcaagcgggagattgctcagg
acttggtgcgcgcatcataaatcactaacttgcttgacattttctggtgacgattctttt
cttatttctggttcagaagacggcacgatcattgtctggcctatgataggtttgctagac
gagacagatcgttggaacttgccttctgtattaactttttcatcggagcactcgtcgtct
ataaccggtgtattaactacatcaagcagctcaagttcggttttaatgtcaagctccctt
gatggcacatgcaaggtatgggacctggttacggggaggcttttacaaacgcaagttttt
ccactgccaatgactgcaatagttcttgatccagccgagaagacattgttttgtggaagt
gcagacggaaggattttcatgaacacgctcgatattggactcgtggaggaggcttctatt
gtttcggaggatgaaccgatggtgctcaagggacacaatggatctataactgctttgacg
ttctgtggattgggcctaatatctgcatccgaggactgcactgcatgcctttgggatgtc
gtcaattgtgtgattattcggcgattcaaccatcttaaaggtcccataactaatttggtt
gtgatcccgcagtcttcgcttctccctagcatgaaccatcacagagcccctaatcaattc
cgagtttccatactcgataaatatcctaagccacccgatgtatccaatggagtacttact
ctcctaccttcacattctcccttggaagatcattgcgttgcctctgaatatcgatccacc
aatttactgaaacagcaatttcttgatttggagaaagaggggacatttgcatcgatgcaa
atgaaggcagaaacaagcatagagagccaggcttgggccatgagaatgacgaagcacgtc
atgcagatgaacaagcatttgcagtcgcgactgctcgatatgatgcaacgccggttactg
cagcagcctcccaatgctagctcaagtactaataatagaaagagaaagaagaccaatggt
ggaagtttgccattgcaaggggaggaacaaccacagtcgtag
DBGET
integrated database retrieval system
