Actinidia eriantha (wild kiwifruit): 130767169
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Entry
130767169 CDS
T09464
Name
(RefSeq) probable CCR4-associated factor 1 homolog 11
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130767169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130767169
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130767169
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130767169
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
DUF4857
Motif
Other DBs
NCBI-GeneID:
130767169
NCBI-ProteinID:
XP_057479932
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All DBs
Position
26:complement(15066588..15067697)
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AA seq
282 aa
AA seq
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MSGDDLDLKPLSKPVTIREVWAGNLESEFDLIRDLIDRYPYISMDTEFPGVVFRPTAVDQ
RYTRRLSPSDHYKFLKSNVDALNLIQLGLTLSDNAGNLPDLGGGGGGFIWEFNFSDFDVA
RDAHAPDSVELLRRQGIDFDRNRSDGIDSSRFAELMMSSGLVCNDSVSWVTFHSAYDFGY
LVKILTRRALPTGLEDFLGILRVFFGDHVYDVKHLMRFCDSLYGGLDRVARTLEVDRVVG
KCHQAGSDSLLTWHAFQKIRDVYFVKDGPEKHAGVLFGLEAF
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcgatgacttggatctcaaacccctgtccaaaccggtaacgatccgagaagta
tgggccggtaatctcgagtccgaattcgatctgatcagggatctgatcgatcggtacccg
tatatttccatggacaccgaatttccaggcgtggttttcaggccgacagccgtagaccaa
cgctacacgcggcggctcagcccctcggatcactataagtttttgaaatcgaacgttgac
gctttaaatttgatccagctcgggctcacactgtcggacaacgccggaaacctcccggat
cttggaggaggaggaggcggattcatctgggaattcaactttagcgacttcgacgtggcg
cgtgacgcccacgcgccggactccgtggagctgctccgccgccagggcatcgacttcgac
cggaaccggtctgacggaatcgactcgtcccggttcgccgagctgatgatgtcgtcgggg
ctcgtgtgcaacgactcggtgagttgggtcacgtttcacagcgcgtacgacttcgggtat
ctggtgaagatcctcacgcgccgcgcgttgccgactgggctcgaggactttttaggaatt
ttgagagtgtttttcggagaccatgtgtatgacgtgaagcacctgatgcggttctgtgat
agtttgtacggcgggttggaccgggtggctagaactcttgaggtggaccgggtagtcggg
aagtgccaccaggccggttcggatagccttttgacgtggcatgcgtttcagaagattcga
gacgtctactttgtaaaagacggaccggagaaacatgccggtgtgttgtttggattagag
gcattttag
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