Actinidia eriantha (wild kiwifruit): 130767223
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Entry
130767223 CDS
T09464
Name
(RefSeq) pre-mRNA-processing factor 39-1-like isoform X1
KO
K13217
pre-mRNA-processing factor 39
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130767223
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
130767223
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Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
HAT_Syf1_CNRKL1_N
HAT_Syf1_CNRKL1_C
UTP6_C
NRDE-2
TPR_7
TPR_MalT
TPR_12
Motif
Other DBs
NCBI-GeneID:
130767223
NCBI-ProteinID:
XP_057479999
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Position
26:complement(14247903..14268258)
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AA seq
853 aa
AA seq
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MGESQPVVGQTSAIMGHTSSGYSSSDFGNTSSDAAAAGGAFAHGASRELAASAVTTTGDL
DPAPAPAVADAASTIPDVFNVGAGALSTDLNYVFQGPATSTNDSKPSDEVAYSSENLAVP
ANTLVDSSQVASYDSTINGNDVSEARNIAFAGISENGNPSDDVHGSASVHQPVDGSVLSG
EEERLWNVVRADSLDFNAWTSLIEETEKVAEDNILKIRKVYDGFLAEFPLCYGYWKKYAD
HESRLSSIDKVMEVYERAVQGVTYSVDIWLHYSVFSISTYGDPETIRRLFERGLAYVGTD
YLSFPLWDKYIEYEYMQQEWSRLAMIYTQILENPNQQLDRYFNSFKELAGSRPLSELRTV
EEAAAAAAVSSEARALEIEGEVHPNAGEQSSQPVSAGLTEAEELVKYIAIREEMYKKAKE
FDSKIIGFETAIRRPYFHVRPLNVAELENWHNYLDFIEGGDDFNKVVKLYERCLIACANY
PEYWIRYVLCMETSGSMDLANNALARATQVFVKRQPEIHLFAARFKEHSGDIPGARAAFQ
LVHTEISPGLLEATIKHANMEHRLGNLEDACSVYEQAIAVEKGKEHTQTLPFLSVQYSRF
LLLVCCNVEKAREVLVLALENAQLSKPLLEALIHLESIQPTPKQIGCLDSLVEKFIVPIP
DNSIVASIAEREELSIIFLEFLDLFGDAQSIKKADDRHAKLFLHHKSTPESKKRNAEDFL
VSDKLKLAKSYSSLPTSAPSVMGAYPSSQNQWAAGYGLQPQAWPQAPQAQGQQWNPGYTQ
QGAYGAYASYGSSYTHPQIPTTVAQNAAYPPTYPVQQAYPQQGYAQPAASVASTPVQQPG
SVAPQAAYYSGYY
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgggagaaagccaacccgtggttggccaaacatctgcaatcatggggcatacatcttct
ggctattcttcctctgattttggaaacaccagctcagatgctgctgctgctggtggtgcc
tttgcccatggggctagtagagaattggctgcttcagctgttacaaccacaggagatttg
gatcctgctcctgctcctgctgtagcagatgctgctagtaccattcctgatgtttttaat
gtaggtgctggagcgcttagtacagatctaaattatgtctttcagggacctgctacatcg
acgaatgattctaagccatctgatgaagtagcttatagtagtgagaatcttgcggtccct
gcaaacactttggtggattcttctcaagttgctagttatgattctaccattaatggcaat
gacgttagtgaagcaagaaatattgcatttgctggtataagtgaaaatgggaatccatca
gatgatgttcatggatctgcttcggtgcaccagccagtagatgggtccgtgctttctggt
gaagaagaacgattgtggaacgtggtgagagctgattccttggattttaatgcatggact
tccctaatagaagagacggaaaaagtggcggaggataatattttgaaaatccggaaagtt
tatgatggcttcctagcagaatttcctttgtgttatggttattggaagaagtatgcagat
catgagtcacgtttgagctctatcgacaaagttatggaggtatatgaacgagcagttcaa
ggagtgacgtattctgtggacatttggttgcactattctgtattttccataagcacatat
ggagatccggagactattcgaaggctttttgagcgaggattagcatatgttggaactgat
tacctatcttttccactttgggataaatacattgaatatgagtatatgcagcaggagtgg
tcccgtcttgcaatgatttacacacagattttagagaatcctaatcaacaactggaccgt
tatttcaacagttttaaggagttagctggaagtcggcctctatcagagctgaggactgtg
gaggaagctgcagctgcagctgctgtgagttcagaagcgagagctctagaaattgaggga
gaggttcatcctaatgccggggaacaatcttctcaacctgtaagtgcaggcttaacagaa
gctgaggagttggtgaagtatatcgccattagagaagagatgtataagaaagctaaagag
ttcgattctaagataattggttttgaaacagctatcaggaggccctactttcatgtacgg
cccctcaatgttgcagagcttgaaaattggcataactatcttgactttattgaaggagga
gatgactttaataaggttgtcaagctttatgaaagatgcctaattgcttgtgcaaattat
ccagagtactggatacgatatgttttatgcatggaaactagtggaagtatggatcttgcg
aataatgcactggctcgtgctactcaagtttttgtcaagagacaaccggaaattcatctt
tttgctgctcgatttaaagagcatagtggagatattccaggagctcgagctgcctttcaa
cttgtgcatactgaaatttctccgggtcttttagaagctactattaagcatgcaaacatg
gaacatcgcctgggaaatcttgaagatgcttgttctgtatatgaacaggccattgccgtt
gaaaaagggaaagaacatacacagactttgcctttcttgtctgtacaatattctcgcttc
ttgcttttggtttgttgtaacgtagaaaaagctcgggaagttcttgttctagcacttgag
aatgcccagctttcaaaaccacttttggaggctttgatccatttagaatcaattcagcca
actccaaaacaaattggatgtttagattcattggttgagaagttcatagttcctatccct
gataattcgattgttgcaagtattgctgagagagaagagctatctatcatctttttggag
tttttggatctcttcggggatgcacaatctatcaagaaggctgatgatcggcatgccaag
ctcttcttacaccacaagagcacaccagagtctaaaaagcgtaatgctgaggactttcta
gtttcagataaattaaagttagccaagtcttattctagtcttcctacatctgccccgtct
gttatgggtgcctatcctagttcacaaaaccaatgggcagcaggttatggtttgcagcct
caagcttggccacaagccccacaagcccaaggacaacagtggaacccagggtatacccaa
cagggtgcatatggtgcatatgctagttacggaagcagctatacacatcctcaaatacca
acaactgtggcccagaatgctgcctatcctcctacatatccagtccagcaggcctacccc
cagcaaggttatgcacaaccagcagcatcagttgcttcgactccagtacagcaacctggt
tcagttgctcctcaagccgcctactatagcggttactactga
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