Actinidia eriantha (wild kiwifruit): 130767599
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Entry
130767599 CDS
T09464
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04142
Lysosome biogenesis
aew04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
130767599
04148 Efferocytosis
130767599
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aew04131
]
130767599
Membrane trafficking [BR:
aew04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
130767599
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
VPS18_solenoid_2nd
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_CDC20-Fz
Beta-prop_WDR5
zf_RING_Vps8
Beta-prop_HPS5
Beta-prop_IFT122_1st
zf_RING_Vps8_fungal
TPR_YpiA
WD40_Prp19
WDR55
zf-RING_2
Beta-prop_WDR3_2nd
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
ANAPC4_WD40
TPR_20
Beta-prop_WDR11_2nd
VPS18_RING_C
EIF3I
Motif
Other DBs
NCBI-GeneID:
130767599
NCBI-ProteinID:
XP_057480493
LinkDB
All DBs
Position
26:complement(15963409..15980256)
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AA seq
955 aa
AA seq
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MSLKPSENGVDGDDEREEEEDSEEEEEEEEDEEEEDEPRLKYQRMGGSVPSLLASDAASC
IAVAERMIALGTHGGSVHILDFLGNQVKELPAHTATVNDLCFDIEGEYIGSCSDDGSVVI
NSLFTDERMQFEYHRPMKAIALDPDYARKSSRRFVAGGLAGHLYFNMKKWIGYRDQVLHS
GEGPIHAVKWRTSLIAWANDAGVKVYDTANDQRITFIERPRGSPRPELLLPHLVWQDDTL
LVIGWGTSVKIASIKTNQNKGTNGTYRHIPMSSMNQVDIVASFQTSCFISGIAPFGDSLV
VLAYIQGEEDGEKEFSSTIPSRQGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYS
LAHAPFSGSSYAGGQWAAGDEPVYYVVSPKDVVIAKPRDAEDHISWLLQHGWHEKALEAV
EAGQGRSELLDEVGSRYLDHLIVERKYAEAACLCPKLLRGSASAWERWVFHFAHLRQLPV
LVPYIPTENPRLRDTAYEVALVALATNPSFHKDLLSTVKSWPPGIYSASPVISAIKPQLN
TSSTTDALKEALAELYVIDGQYEKAFALYADLMKEDAFDFIEKHNLHDAVREKVVQLMMI
DCKRAVPLLTQHRDLITPSEVVSQLLAAGKKCDSRYFLHLYLHSLFVANPHAGRDFHDMQ
VELYADFDPKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNSKQALAVIINN
LGDIEEAIEFVSMQQDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVNIVPNGLEI
PRLRDRLVKIITDYRTETSLRHGCNDILKTDCVNLLIKYYKEATRAIYLSNKEDEARAKR
DEIRASQSSERAPIARTMEVKSKTRGSGRCCICFDPFSIQNVSIIAFFCCHSYHATCLSD
STISVSSSNKGSEAASRETESYYEYGNGDANEEDDDDDTSGGTRMRCILCTTAAG
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgaagccatcagagaacggcgtcgacggcgacgatgagcgagaagaggaggaa
gattcggaggaggaagaagaggaggaagaagacgaagaagaggaggatgagccgaggctc
aagtaccagagaatggggggaagcgtgccttcgctcctcgcgagcgacgccgcgtcgtgt
attgccgtggcggagcgaatgatcgcgctcggcactcacggcggctccgttcatatcctt
gatttcctcggcaatcaagtaaaggaattacctgctcatacagcaactgtcaatgatctt
tgttttgacatagaaggtgaatacatcggaagctgttcagatgacggatctgttgtaata
aacagtctttttactgatgagagaatgcaatttgagtatcatcgcccaatgaaggcgatt
gctctggacccagattatgcaagaaaatcatccagaagatttgttgctggtggtttagca
ggtcatttgtattttaatatgaagaagtggataggctaccgtgaccaggttcttcactct
ggtgaaggcccaattcatgcagtgaagtggagaacaagtctgattgcttgggctaatgat
gcgggtgtcaaggtttatgatactgctaatgatcagcgcataacctttattgagagacct
cgagggagcccacgtcctgagcttctgcttcctcacttagtttggcaggatgatacttta
ttggtgattggctggggaacgtctgtgaaaatcgcttccataaaaacaaatcagaataaa
ggcactaatgggacgtataggcatattccgatgtctagtatgaatcaggtggatattgtg
gcatcgttccaaaccagttgtttcatttctggaattgctccctttggggattctttggtg
gttctagcttatattcagggagaagaagatggagagaaggaatttagcagcactattcca
tcccgccagggaaatgctcagagaccagaagttcgtgttgtcacatggaataatgatgag
cttgcaacagatgcactacctgtccatggctttgagcattacaaggcaaaagactattcc
cttgctcacgctccgttctcaggtagcagctatgcaggtggtcagtgggctgctggtgat
gagccagtatactacgttgtatccccaaaggatgtagttattgcaaaacctagggatgca
gaagatcatatttcatggcttcttcaacatggatggcatgaaaaagctttagaagcagtt
gaagctggacaagggcggagtgagcttcttgatgaggtggggtcaagatatcttgaccat
ttgattgtggaaaggaagtatgctgaagccgcatgtttatgtcccaaattgctgcgagga
tccgcttcagcatgggagagatgggttttccactttgctcatcttcgtcagcttcctgta
ctggttccatacataccaacagaaaacccaaggttacgtgatactgcgtatgaggttgcc
cttgttgctttggcaacaaatccatctttccacaaggatctcttgtcaactgtcaaatct
tggcctcctggaatttattctgcctcccctgttatctcagccataaaacctcagcttaat
acgtcatctacgactgatgccctcaaagaggcactagcagagttgtatgtaattgatgga
cagtacgagaaagcttttgcactttatgctgatcttatgaaggaagatgcatttgacttc
attgaaaaacataacttacatgatgcggttcgtgaaaaggttgtccaactgatgatgata
gattgcaaacgtgcagtaccattgttgacccaacacagagacttgatcactccatctgaa
gttgtttcacagctcttggctgcggggaagaagtgtgattccagatactttctacattta
tatctgcattctctttttgtagctaacccgcatgctggaagggatttccatgatatgcag
gtggagctttatgcagacttcgatccaaaaatgttgcttccatttcttcgcagtagtcag
cattatacacttgagaaggcatatgaaatttgtgtcaaaagggatcttttgagagagcaa
gttttcatccttggaagaatgggaaattcaaaacaagcacttgcggttatcataaataac
ttgggggatattgaagaggctatagaatttgtgagtatgcagcaagatgatgaactttgg
gaagaattgataaagcagtgtcttcataagcctgaaatggtgggagtgttgctggagcac
actgttggcaatctcgatccgctctatattgtcaacatcgtgccaaatggattggagata
cctcggttgagggaccggctagtcaaaatcataacagactacaggacagaaacttctctt
agacatggatgtaacgatattctgaagactgattgtgttaacctgttgatcaaatactat
aaagaagcaacgcgtgcaatttacttgagcaacaaagaagatgaagcacgtgccaaaagg
gatgaaattagggcttctcagtcaagtgagagggcaccgatcgcgagaactatggaggtt
aagtcgaagaccagaggaagtggacggtgttgcatttgttttgatccattctccatacag
aatgtatctatcattgcattcttctgctgtcactcatatcacgcaacttgtctttcggat
tctaccatttccgttagtagcagcaataaagggtctgaagccgcttcccgggaaacagaa
tcatactacgagtatggcaatggtgatgccaatgaagaggatgatgatgatgatacttca
ggtggcactaggatgcgttgtatcttgtgtactacagctgccggttga
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integrated database retrieval system
