Actinidia eriantha (wild kiwifruit): 130767737
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Entry
130767737 CDS
T09464
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03030
DNA replication
aew03410
Base excision repair
aew03420
Nucleotide excision repair
aew03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
130767737
03410 Base excision repair
130767737
03420 Nucleotide excision repair
130767737
03430 Mismatch repair
130767737
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aew03032
]
130767737
03400 DNA repair and recombination proteins [BR:
aew03400
]
130767737
DNA replication proteins [BR:
aew03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
130767737
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
130767737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
AAA_22
RCF1-5-like_lid
PTCB-BRCT
Rad17
AAA_30
AAA_19
BRCT_2
RsgA_GTPase
AAA_assoc_2
AAA_5
Gp44_lid
nSTAND3
RuvB_N
Zeta_toxin
Sigma54_activ_2
AAA_24
AAA_14
AAA_18
NTPase_1
TsaE
DNAX_ATPase_lid
AAA_16
AAA_28
Motif
Other DBs
NCBI-GeneID:
130767737
NCBI-ProteinID:
XP_057480701
LinkDB
All DBs
Position
26:13076332..13096854
Genome browser
AA seq
1016 aa
AA seq
DB search
MSDIRKWFMKQHDKNNGNAPKAAEPVTAEKRSQVTSSWTNRLVHVDQESFGRRKTSKYFS
AEKQKPKDEKGTEELSAKRKFQKGGEVSSDVKQPPVKKLHKFDFDEDGDDFVLPNSRKGV
VDVTPSKKLKSGSGRGIAQKSKNIDESDEDKKDTKPHLKFAGRGRGGRGASTAQAGGKCT
DVNGSDEDNDNDNDTKSPLKASGRGRGGRGASTVPGGGRGRGGGGRGGFMNFGERKDPPH
KGEKEVPEGASNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRVTGSVSKKTNYLLCDED
IEGRKSSKAKELGTAFLSEDGLFEKIRASNQGKTAAKEEPKKPVNKSVASTPKKSPQKIE
LKNQARSSSAKTVDLKRPTPDASPAKWKITGDAWLQWTEKYRPKVPNDLVGNQSLVKQLH
DWLTHWDEQFLSTGSKGKLKKHNDSSAKKAVLLSGSPGIGKTTSAKLVSQMLGFQTIEVN
ASDSRGKADAKIEKGIGGSTANSIKELVSNEALSVNMDRSKYPKAVLIMDEVDGMSAGDR
GGVADLIASIKVSKIPIICICNDRYSQKLKSLVNYCLMLSFRKPTKQQMAKRLMQIANTE
GLQVNEIALEELAERVNGDMRMALNQLQYMSLSMSVIKYDDVRQRLLSSAKDEDISPFTA
VDKLFGFNGGKLRMDERIDLSMSDPDLIPLLIQENYINYRPSSVGKDDNGMKRMSLIARA
AESIADGDIINVQIRRYRQWQLSQTGTLASCIIPAALLHGQRETLEQGERNFNRFGGWLG
KNSTTGKNLRLLEDLHVHLLASRGSSLGRTTLRVDYLTLLLKQLIDPLRVLPKDEAVEKV
VEFMDFYSISQEDFDTVVEISKFKGYPNPFDGVLPAVKTALTRAYNKGSSSRVIRTADLI
NLPGIKKAPKKRVAAMLEPVDDGLAEDDGEALGENDENSSDTEDTGDATVGEKNLQLDLQ
LLNSKGIQVDMDLKGTTGNKGAKKAPSGRGRGGGGGSDSSDRKGGRGSGTASKRKR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatattaggaagtggtttatgaaacaacacgacaagaacaatggcaatgcacca
aaggcagcagagcccgtgactgcggagaagcgttcacaggtcacctccagctggacaaac
cggttagtacatgtagatcaagaaagttttggaagaaggaaaactagcaagtacttttct
gcagagaaacaaaagccgaaagatgaaaagggtacggaagaactctcagcgaaaagaaag
ttccaaaagggtggtgaggtatccagcgatgtgaaacagccacctgtaaagaaacttcac
aaatttgattttgatgaagacggcgatgactttgttttgcccaattcaaggaagggcgta
gtggatgtcacccccagcaagaaattgaagagtggttcaggtagaggaattgcccaaaaa
tctaaaaatattgatgagagtgatgaagataagaaagataccaaacctcatcttaaattt
gctggaaggggtcgtggaggaagaggtgcttcaacagcacaggctggcggcaaatgcacc
gacgttaatggaagtgatgaagataatgataatgataatgataccaagtctcctcttaaa
gccagtggacggggccgaggtggaagaggtgcatcaacagtaccaggtggtggaagaggc
agaggtgggggaggacggggtggattcatgaattttggtgaaaggaaagatcctccacac
aaaggagaaaaggaagtccccgaaggtgcttctaactgtttagctggtttgacttttgta
atcagcggaacacttgacagtttggaaagagaagaagctgaagatttgattaaacgtcat
ggaggtcgtgtcactggatctgtcagcaaaaagacgaattatctcttatgtgatgaagac
attgagggacgaaaatcctccaaagccaaagagctgggtactgcctttcttagtgaggat
gggttgtttgaaaagattcgcgcatcaaatcaaggaaaaacagctgcaaaggaagaacca
aagaaacctgtgaataagtcggttgcatctacgcctaagaagagccctcaaaaaatagaa
ctgaagaatcaagcgcgcagctcttcagctaaaactgtagatcttaaacgtccaactcca
gatgcttctcctgctaagtggaaaattacaggagatgcctggttgcaatggacggaaaaa
tatagacctaaagttccaaatgacctcgttgggaatcagtcactggtgaagcagcttcat
gattggcttacacactgggatgagcagttcctgagtactggcagcaaggggaagttaaaa
aaacataatgactcgagtgctaaaaaagctgttttattaagtggttcacctggcataggg
aagacaacatcggcaaagttggtcagtcagatgcttggtttccaaacaattgaggtcaat
gctagtgatagtcgtgggaaggctgatgccaaaattgaaaaaggaataggtggaagtact
gcaaattctataaaggaacttgtttccaatgaggcccttagtgtcaacatggatcgttcg
aagtatccaaaagctgttcttattatggatgaggttgacggcatgtctgctggagataga
ggtggtgtggctgatcttattgctagcatcaaagtctccaaaattcctatcatctgcatt
tgtaatgaccgctacagccaaaaactaaagagtctggtgaactactgtttgatgctgagc
ttcaggaagcctacaaagcagcagatggcgaagaggttaatgcaaattgcaaacacagaa
ggacttcaagttaacgagattgcacttgaagagcttgcagaaagagttaatggagacatg
cgcatggctctgaaccagttacagtatatgagcctctccatgtcagtcattaaatatgat
gatgttagacagcgccttcttagcagtgcaaaggatgaagatatttcgccattcacagct
gttgataagctttttggctttaatggggggaaattgcgtatggatgagaggattgaccta
agcatgagtgatcctgatttgatccctctgcttattcaggaaaactatataaactatagg
ccaagttcggttggcaaagatgataatgggatgaagcggatgagcttaattgcccgtgct
gctgaatctattgcagatggtgatattataaatgtacaaattcgacgatatcgacagtgg
caactctctcagactggaacccttgcatcttgcataattcctgctgcattgttacatggg
caaagggagacacttgaacagggggaacgcaactttaatagatttggcgggtggctggga
aagaactcaacaacgggaaagaatttgagacttttggaggatctgcatgttcatcttctt
gcttctcgtggatctagtttgggaaggacaacgttgcgagttgattacctgactcttctt
ctgaaacagttgattgatccacttcgagtgctgcctaaggatgaagctgtggagaaggtt
gtggaatttatggatttttactctataagccaggaggactttgatactgtcgtggagata
tcaaaatttaagggatacccaaatccgttcgatggcgttctgccagctgtcaaaactgcg
ctgactagggcatacaacaaaggaagcagctcgcgtgtgattcggactgccgatttgatc
aaccttcctggtattaaaaaggcccctaaaaagcgggttgcagcaatgctggaaccagtg
gacgatggattagcagaggacgatggtgaagcattgggagaaaatgatgagaactcttca
gacacagaggacacgggagatgctactgttggtgagaaaaatctgcaattggatctccag
ctccttaattcaaaaggaattcaagtagacatggatttgaaggggactaccggaaacaaa
ggtgccaagaaggcaccatcaggcagaggcagaggaggaggtggtggttctgactcctca
gataggaaagggggacgaggttctgggacagcttccaagaggaagagatga
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