Actinidia eriantha (wild kiwifruit): 130767933
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Entry
130767933 CDS
T09464
Name
(RefSeq) RNA polymerase sigma factor sigC
KO
K03093
RNA polymerase sigma-I factor
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130767933
Transcription machinery [BR:
aew03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
130767933
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
GPW_gp25
Motif
Other DBs
NCBI-GeneID:
130767933
NCBI-ProteinID:
XP_057480991
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Position
26:9214216..9222276
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AA seq
556 aa
AA seq
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MGVGFRLNLKWVNPVQSPSLSNSPNWPSSSRGRERSYDSGRVSFAFSISWQSENLYNDPP
KAHRCSFSPQTLENDCSEMEGIKRNIVKTSHGGIDMLDDNIHMPIGDDKISFPYSLQATK
ASRFGLLLENLDMLEATFADSNVGKLESDILTQLERLGALKLFHACLSRTLKSPIFFDIS
DSPSQLIKQPPLEGTVDVHVGKLIVHSRKKEKRKSTSERALQKASVLALHSKPIQKDFRT
SDLSSAKRPSKARSRRLCVASNEAEMSRGVKLVEDLEIIKTMLEKETGQVASLSSWAEAV
GVDAKVLQQRLHFGWCCRDELLRSSRSLVVYLARNYRGLGVAIEDLIQAGNFGVLQGAIR
FDHTKGYRFSTYVQYWIRKSMSTWVERHSRGIRIPRTLRKAINQIQKARKALNSSHMKYL
DDEEIAKFTGLSLAKITSASKCLRVVGSIDQKMGDWVNSAKFLECTPDTSIKSPEEVVMR
QHMTKDLHDLLETLEPRERQVLVHRFGLGDHQRKSLEEIGRLFHVSKEWIRKIERTALTK
LKDEKSSRNLIHYLYL
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgggtgtgggttttaggctaaatctcaaatgggttaatccagttcagtccccttctctc
tccaattcaccaaattggccttcctcatctagagggagggagcgttcatatgactcagga
agggtgtcctttgctttttctatttcttggcagagtgagaatctgtataatgatcctccg
aaagcacacagatgttcattttctccacaaactctagaaaatgattgctcagaaatggaa
ggaataaagaggaatattgtcaagacatcacatggtggcatagacatgcttgatgataac
atccacatgccaattggagacgataaaatttcatttccatatagcttacaagcgactaag
gcgtcgcgttttggtttattattggaaaaccttgatatgttggaggcaacattcgctgat
tcaaacgtgggaaaattggaaagtgatattttaacacaactagaaaggctaggagctcta
aaattgttccacgcctgtctatccaggacccttaaatccccaatcttttttgacatatct
gactcgccaagtcaacttattaaacagcctccattggaaggaacagtggatgttcacgtg
ggtaagcttatcgttcactcgagaaagaaggaaaaaagaaaatcaacaagtgaaagagct
ttacaaaaagcttctgtgctggcattgcactcaaaacccattcaaaaggactttcgaacg
tccgatttatcttctgcaaaaaggccatcaaaagctagaagtagaagactatgtgttgct
agtaatgaggctgaaatgtcaagaggggttaagttggtcgaggacttggaaataatcaaa
accatgttggaaaaagagactggacaagtagctagcttgagtagctgggcagaagctgtc
ggcgttgatgcgaaagtattgcagcagcgtttgcattttggttggtgttgtagggatgag
cttctgaggagctcacgctcccttgttgtataccttgcaagaaactacaggggacttgga
gtggcaatagaagatttgattcaggcagggaattttggtgttctgcaaggtgcaataaga
tttgaccacactaaagggtacagattctcaacttatgttcagtactggataaggaagtca
atgtcaacatgggtggaacgacattcgagagggatccgaattcctcgcactttaaggaag
gcgataaatcagatacaaaaagctcgtaaggccctaaacagcagccatatgaaatacctt
gatgacgaggaaattgccaagttcacaggactatcattagctaaaataacttcggcaagc
aaatgcttgagagttgtgggatccattgatcagaagatgggcgattgggtcaatagcgct
aagtttttggagtgtacaccggatacatcaataaagagccccgaagaagttgtcatgagg
cagcacatgacaaaagacttgcatgatcttcttgaaaccctagaaccgagagagaggcaa
gtgttggtccatagatttgggctaggtgaccatcagcgcaagtcacttgaggagatcggg
aggcttttccatgtgagcaaagagtggataaggaagatagaacgaacagctcttacgaaa
ctaaaggatgaaaaatccagcagaaatttgatccattatttgtacttgtag
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