Actinidia eriantha (wild kiwifruit): 130768126
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Entry
130768126 CDS
T09464
Name
(RefSeq) zinc finger CCCH domain-containing protein 41-like
KO
K13192
RNA-binding protein 26
Organism
aew
Actinidia eriantha (wild kiwifruit)
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
aew01009
]
130768126
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130768126
03041 Spliceosome [BR:
aew03041
]
130768126
Protein phosphatases and associated proteins [BR:
aew01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
130768126
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
130768126
Spliceosome [BR:
aew03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
130768126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
zf_CCCH_4
RRM_Nup35
DUF4760
zf-CCCH
Motif
Other DBs
NCBI-GeneID:
130768126
NCBI-ProteinID:
XP_057481113
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All DBs
Position
27:1431465..1443022
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AA seq
881 aa
AA seq
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MDPMELRVSSPTAGGLSPSDCVSDPDEKEISDEDDDDRNHKHRRRETPSQSLERDAVEQV
VIRPYRKRNKPLENGLPYRENESAKFEKRRPGLATFSRAPNRVNQSFSSQLGSSRGRGRE
SGSWSQSDPRFSSVDIASQMFPQASVHPSLFGGRVLPNVSNSQSASRSAFGLIPGVPNGS
LDTIHSRGLQGMLGSSMGPLNIGIPRQRCRDFEERGFCLRGDMCPMEHGVNRIVVEDVQS
LSQFNLPVSIPSSHLLGAAALPSVSGPSSSLMNSKSLHNKSNKPGMADDGYNMNDVFSSS
SCAGGADFYDPDQPLWTNDCPETSTALLGLNSSKHDQPKRLLDIESSDRHRVRLFDGTDN
KHQMRSSAAAVGSQSTSSSAGGIIGTSKSEMKEKIVAPISSSNNMENEAKEDQKPLTNLQ
GSLKIQGDIGHNIRKLSQKALRTLFINGIPQKDNKREALLSHFRKFGDVIDIYIPFNSER
AFVQFSRREDAEAALKAPDAVMGNRFIKLWWANRDSIPDDRMSSASSVSVTPHGLAAVSV
PTPPPVAHKRKDDVQPAAPKISVSNASVASALASDHPKPVVASSPKAPPPLHKKLESLEL
LKEELRKKQELLDQKRNDFRRQLNKLGKQATGLKGEVVSEQIAKRQKTGIVADVATTASP
MSSDFGTVVASPQAEMVTEKNKFVENVVHQSCKPNAVVALHEPASLKQSIRPLAPAGPYG
MNRFKLDNRPTAFKIIPPLPTGLDNVAVLKNHFSSFGELSAVELEDVESSDSVASRNCSA
RISFTTRSSAEMAFASGKCWQGCNLQFMWLASGNTKHDNGGREDASAASNLPARQVAPID
SPKVDDTRNAKSELLVRKDSCGECMERDEDLHSSSSAMSHD
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggatccaatggagctcagagtttcatctccaactgccgggggtctttcaccttctgat
tgtgtcagtgatcctgatgagaaagaaatcagcgatgaagatgatgacgatcgtaatcat
aagcatcgtagacgggagacaccgtctcaatctctggagagagatgctgtggaacaagtt
gtaataaggccatatagaaagagaaataaacctcttgaaaatggacttccttaccgggaa
aacgagtctgcaaagtttgaaaaacgacgccccggcttagcaacattttctcgggctcca
aatagggttaatcaatcattttcttctcagcttggttccagtaggggtagaggaagggaa
tctggttcctggagccaatctgatccaaggttcagctctgtggatattgcctctcaaatg
tttccacaggcatctgttcatccaagtctgtttggagggagagtgttgccaaatgtttca
aactcacagagtgcatctcggagtgcatttggattgattccaggagtaccaaatggtagc
ctggatacaattcattcccgtggtttacaaggaatgcttggatcatcaatgggtccacta
aatataggtatccctcgccaaagatgtagagactttgaagagcgtggattttgcctaaga
ggagacatgtgtccaatggagcatggtgtcaatcggattgttgttgaagatgttcagagc
ctctcacagttcaatctcccagtttcaattccaagttcacacctgctaggagcagctgct
ttaccttctgttagtggtccttcaagttcattgatgaatagcaagagtctacataataaa
agtaacaagcccggaatggctgatgatggatacaacatgaatgacgttttcagcagttca
tcttgtgcaggtggagctgatttttatgatcctgatcagcctctgtggactaatgattgt
ccagaaacttcaacagcactgctaggactaaattcatctaagcatgaccaacccaagcgt
ttgttggacattgaatcctctgaccgtcaccgtgtcaggttatttgatggcactgacaat
aagcaccagatgaggagctctgcagctgctgttggatctcaaagtacaagttcatctgca
gggggaataattggtaccagtaaatcggaaatgaaagagaaaattgttgctcccataagt
tcctcaaataatatggaaaatgaagcaaaggaagatcagaaaccattaaccaatcttcag
ggttctctgaaaatacaaggtgatatcggacataatatccggaaactttctcaaaaggca
ctacgtactctatttatcaatggcattccacagaaagacaacaaaagagaggcccttctt
tctcattttcggaaattcggagatgttattgatatttatattccatttaatagtgaacga
gcttttgttcagttctctaggagggaagatgcagaggctgctctgaaggcacctgatgct
gttatggggaataggtttatcaagttatggtgggctaatcgggatagcattcctgatgac
agaatgagtagtgccagtagtgtatcagtaactcctcatgggttagcagctgtttcagtt
cccactcctccacctgttgctcacaaacgaaaggatgatgtccagcctgcagctccaaag
attagtgtctccaatgcttctgttgcttctgcacttgcttctgatcatcctaagcccgtg
gtggccagcagtcccaaagccccacctcctttgcataagaagctggagagcttagagctt
ttgaaggaggaactccgtaagaagcaggaactgcttgatcagaagcgcaacgacttccga
cgccaattgaataaactcgggaaacaagctacaggtctcaaaggtgaagtagtatctgag
cagattgctaagagacaaaaaacaggaatagtagctgatgttgcaacaactgcatctccc
atgtccagtgattttggtaccgttgtggcatcaccacaagcagaaatggtgactgagaag
aacaaatttgtggagaatgttgtgcaccaaagttgcaaacctaatgcggttgtggcactg
cacgaacctgcaagcttgaagcagtcaattcgtcctttggcacctgcaggaccctatggc
atgaatagattcaaattggacaatcgtcccactgccttcaaaattattccgcctttacca
actggccttgataatgttgctgttttaaagaaccacttttcatctttcggggaactttcg
gctgttgagctagaagatgtcgagtctagtgactcggtggcttccagaaattgctcagct
cgcatatctttcaccactcgtagttcagctgagatggcatttgcaagtggtaaatgctgg
caaggctgcaatttgcagtttatgtggctggcatctggtaatactaaacatgacaatggt
ggtagagaagacgcttcagctgcttctaacctgcctgcaagacaggttgctcctattgat
tctccaaaagtggatgacacgagaaatgcaaaatctgaacttttggtaagaaaagatagt
tgtggagaatgtatggagcgcgatgaagatctgcactctagttcatctgcaatgtcacat
gactaa
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