Actinidia eriantha (wild kiwifruit): 130768283
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Entry
130768283 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: SWI/SNF complex component SNF12 homolog
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
130768283
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130768283
03036 Chromosome and associated proteins [BR:
aew03036
]
130768283
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
130768283
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
130768283
PBAF complex
130768283
GBAF(ncBAF) complex
130768283
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
Rogdi_lz
Motif
Other DBs
NCBI-GeneID:
130768283
NCBI-ProteinID:
XP_057481289
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Position
27:complement(548106..551224)
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AA seq
557 aa
AA seq
DB search
MSASNNNLPKNIGASSPFASVGIGSSNMPANPNAHLQSQSQAQQQIGSGFPGQYHMSQLS
AANAQAYAQAHALAQSHLKAQAHAQAQAQAAHAQFQAQLQAQGLAINQPHTSGIGNAGSS
SPMVNTPGNASAKRPPQKPPVRPPAGFSANNMVLPLRNMELAAAARKKKQKLPEKQFQER
VAAILPESALYTQLLEFESCVDAAVTRKKIDIQEAIKNPPSIQKTLRIYVFNTFANQIRT
IPKKPNADPPTWTLKIIGRILEEGIDPDQAGIMQRSSSLYPKFSSFFKRVTISLDQRLYP
ENHIIMWDSARSPTPQEGFEVKRTGDKEFTANIRLEMNYAPEKYKLSPALMEVLGIEVDT
RPRIIAAIWHYVKARKLQNPNDPSFFHCDPPLQKVFGEEKLKFTTVSQKISHHLTPPQPI
HLEHKIKLSGNNPAGNACYDVLVDVPFPIQKELNALLANTEKTKEIDACDEAICAAIRKI
HEHRKRRAFFLGFSQSPVEFINALIESQGRDLKLVAGEASRSAEKEHRSEFFNQPWVEDA
VIRYLNRKPVTDCPGST
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgagtaacaataacctaccgaaaaatattggggcttcatctccgtttgcaagt
gttgggataggttcttcaaatatgcctgcaaatcctaatgcacatctccaatcacagtcc
caagcccaacaacaaattgggtctggcttccctggtcaatatcatatgtctcaactatcg
gcagctaacgcccaggcatatgctcaagcccatgcgcttgcccaatcacatttaaaggct
caggctcacgcccaagcccaagcgcaagcggcacacgcccaattccaggctcagttacaa
gcccaagggcttgctattaatcaaccccacacttcggggattggtaacgcgggttcctct
tccccaatggttaacacgccgggcaatgcaagtgcgaagcgtccacctcagaagccgccg
gttcggccacctgctggcttctcagcgaacaacatggtcttgcccctgagaaatatggag
cttgcagctgctgcccgtaagaagaagcagaaacttcctgagaagcagtttcaggagaga
gtggctgcaattttgcccgaatctgcactttacactcagctacttgagttcgaatcgtgt
gtagatgctgctgtgacgagaaagaaaattgatatccaggaggccattaaaaacccaccc
tccattcagaaaacgcttcggatctatgtattcaatactttcgctaatcagattcgcacg
attcctaagaagccaaatgctgacccccctacttggaccctcaagataattggaaggatc
ttggaagagggaatagatcctgatcaagctgggataatgcagagatcgagttccttgtac
ccaaagttctcatctttcttcaaaagagtcaccatttccttggaccagagactatatccg
gagaaccatatcattatgtgggatagtgctcgatcacccacacctcaagagggttttgaa
gtcaagaggacaggggataaagaatttacagcaaatataaggttagaaatgaattatgcg
cccgagaaatataagctttctccagcattgatggaagttcttggtattgaggttgatacc
cgccctagaatcatagcagctatctggcattatgtaaaggctaggaagttgcagaaccca
aatgacccttctttttttcattgtgacccaccactccagaaagtatttggggaagaaaag
ttgaagtttactactgtttcacagaagatatcgcatcatttaactcctccacagcctata
catttggagcacaagatcaagctttcagggaataacccagctggaaatgcatgctatgat
gtgttggtggatgtcccctttccaatccagaaggaattgaatgcgttattggccaacaca
gagaaaaccaaagagattgatgcctgcgacgaagcaatttgtgctgctataaggaagatc
catgagcaccgtaagagacgagccttctttcttggcttcagccaatcgccggtggaattt
attaatgctttaattgaatctcaaggcagagatctgaagcttgtagcaggtgaagcaagt
cgtagtgctgaaaaagagcatcggtcagaattcttcaatcaaccctgggttgaagacgct
gttattcgttatctgaatcgcaagccagttacagactgtcctggaagcacatga
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