KEGG   Actinidia eriantha (wild kiwifruit): 130769316
Entry
130769316         CDS       T09464                                 
Name
(RefSeq) protein transport protein SEC13 homolog B
  KO
K14004  protein transport protein SEC13
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03013  Nucleocytoplasmic transport
aew04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    130769316
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    130769316
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130769316
   04131 Membrane trafficking [BR:aew04131]
    130769316
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     130769316
Membrane trafficking [BR:aew04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    130769316
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    130769316
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    130769316
SSDB
Motif
Pfam: WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd Beta-prop_WDR35_TULP_N Beta-prop_Vps41 Beta-prop_RIG_2nd WDR55 ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR90_POC16_2nd EIF3I NBCH_WD40 WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SCAP WD40_2 Beta-prop_DCAF12
Other DBs
NCBI-GeneID: 130769316
NCBI-ProteinID: XP_057482592
LinkDB
Position
27:2020738..2023191
AA seq 302 aa
MSAQKIETGHKDTVHDVSMDYYGKRVATASSDATIKIIGVSNNSTSQYLATLSGHQGPVW
QVAWAHPKFGSILASCSYDGKVIIWKEGNQNEWAQAHIFTDHKSSVNSIAWAPHELGLCL
ACGSSDGNISVFTARSDGGWDTTRIDQAHPVGVTSVSWAPSMAPGALVGSGMLDPVQKLA
SGGCDNTVKVWKLYNGNWKMDCFPALQMHTDWVRDVAWAPNLGLPKSTIASASQDGTVVI
WSVAKEGDQWEGKVLKDFKTPVWRVSWSLTGNLLAVAAGDNNVTLWKEAVDGEWQQVTTV
EQ
NT seq 909 nt   +upstreamnt  +downstreamnt
atgtctgctcagaagattgaaaccggtcacaaagacactgttcatgatgtgtccatggat
tactatggaaagcgtgtagcaactgcttcatctgatgccactatcaagataattggtgtg
agcaacaactctacttcgcagtaccttgcaactctgagcggccatcaaggccctgtttgg
caggttgcttgggctcaccccaagtttgggtcaattcttgcttcttgctcctatgatggt
aaggtgataatttggaaggaaggtaatcaaaatgagtgggcacaggctcatatttttacc
gaccataaatcatctgtcaattctattgcttgggcgcctcatgaacttggcctctgctta
gcttgtggatcgtctgatggcaatatctcagttttcactgccagatctgacggtggttgg
gacaccaccaggattgaccaagcccaccctgtcggagtgacctcggtttcatgggccccg
tccatggctcctggtgctttagttggatctggcatgctggatcccgttcagaagctggct
tctggtggctgtgataatacggtgaaggtatggaagttatataatggaaattggaagatg
gactgcttccctgcactacagatgcacactgattgggtgagggatgtggcttgggcacct
aacctaggccttccaaagtctactatcgcaagtgcttcacaggatgggacagttgtcata
tggtcagtggcaaaagaaggtgatcaatgggaaggcaaagtgttgaaggatttcaagacc
cctgtttggagggtctcatggtccctgaccgggaacttgttggctgtggctgctggagac
aataatgtcacattgtggaaagaagcagttgacggagagtggcaacaagtgaccacagtt
gagcaatag

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