Actinidia eriantha (wild kiwifruit): 130770051
Help
Entry
130770051 CDS
T09464
Name
(RefSeq) SNF2 domain-containing protein CLASSY 1-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
130770051
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aew03400
]
130770051
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
130770051
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
SAWADEE
Motif
Other DBs
NCBI-GeneID:
130770051
NCBI-ProteinID:
XP_057483318
LinkDB
All DBs
Position
3:12696466..12705061
Genome browser
AA seq
1275 aa
AA seq
DB search
MKKRNIHQSTHPFDAYPFEAFYYGSWKSVERLRIRDDAITMLLVDGGDLIEENVPMANLR
IRSRKATLSDCTCFLRPGLDVCVLSTSQLTENTSEEESQEPVWLDAKIKSVERKPHEPNC
ACQFYVSFYATQGPLGMTMKTLSKEIVMVHIDQISILQKLAWYPCEHEHYRWEFTEDCFS
LHKYKLFTGKFSSDLSWLLVASVLKQLEFDVRSIQNRIVYHILDDDTDNGSPNSESHAKA
VNFKLDNGLSVPIVVPFTSIDTLEKGTGRGMHGDEKGSSYDVMGLRRSKRRYVQPERYLG
CGDLPETDIDGTRFGYKTYRLEYEEMPLALSIQDDHAFSLDDHSELDERIHSYRKENFLR
WQSKIKSREVKLLVCSQTEHQPQLDYEIKDQLQLAIVPVLPDETDQTVHEEDPLDAEIPG
KYSGDIDEVATKYIYTNCAPRVHRNCTSEIDFPDAEGRWGWKESRKKRHRRRRDKFKFSE
KENFPDLAMYRKGPFSAGMYKEMIRRCMENIKSSINKEQPLVIDQWKDFQAGKFSDERDS
SDVPQKNVEEDSEIEMLFKEMELCMASAYILEDSEGPDVEVPAEISQNPSKLWEQFCRHE
FKLNEEIGILCQLCGYVSTEIKDVSPTFLQSTSSVPNKGPRSEQDSGHKSDEDGGGLDLV
CVPASSNTPLSEGEDNVWALIPDLKRKLRFHQKRAFEFLWRNIAGSVVPADMESAVKARG
GCVISHSPGAGKTLLIIAFLVSFLKLFPGARPLVLAPKTTLYTWYKEIIKWEIPIPVYQI
HGGQTYRGEVNRQKWRICPGAPKPNQDVMHVLDCMEKIQKWLAHPSVLLMGYTSFLTLTR
EDSKYSHRKYMGQVLRQSPGILILDEGHNPRSTKSRLRKALMKVDTDLRILLSGTLFQNN
FGEYFNTLTLARPRFVKEVLKELDPKFKRRKKGAKTNFSLENRARKLFIDKIGKKIDSSV
ADERTKSLNTLRNLTGGFIDVYEGGISDNLPGLQCYTLMMKSTPYQQELLTKLQNQRPAY
KGFPLELELLITLGSIHPWLIRTTTCSNQYFSMEVLEDLDRYKFDLKFGSKVRFVMSLIP
RCLIRKEKVLIFCHNIAPINLFLEIFEAFYGWKKGEEVLVLQGDLELFERGRVMDKFEEP
GGASKVMLASINACAEGISLTAASRVILLDSEWNPSKSKQAIARAFRPGQAKEVYVYQLL
ATGTLEEEKHSRTTWKEWVSSMIFSEEQVEDPSHWQAEKIEDDVLREIVEEDRATLFHMI
MKNEKASNAVVRGKD
NT seq
3828 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaggaatatacatcaaagcacacatccatttgatgcatacccttttgaggca
ttttattacggctcatggaaaagtgtggagcgattgcggattagggatgacgcaataacc
atgcttttggtagatggtggagatttgattgaagaaaatgttcccatggcaaacctacga
ataaggtcgagaaaagcaactttgtcagattgcacctgctttctaaggccaggacttgat
gtttgtgtgctatccacctctcaacttacagaaaatacaagtgaggaggaaagtcaggag
cctgtctggttggatgctaaaattaagtctgtagagaggaagcctcatgaaccaaattgt
gcttgccaattttatgttagcttttatgctacacaaggccctctcggtatgacaatgaaa
acacttagtaaggagatcgtcatggtgcatattgatcaaatttcaatccttcagaaactt
gcatggtacccttgtgaacatgagcactaccgttgggaattcactgaggattgtttttca
ctgcacaaatataaattattcactggaaaattctcatctgacctttcatggctacttgtt
gcatctgttttgaagcaacttgaatttgatgtcaggtcaatacagaacagaattgtctat
catattttggatgatgacactgacaatggttcaccaaattctgaaagccatgcaaaagct
gtgaattttaaattagataatggactttcagtccccattgttgttcccttcacttcgatt
gataccctagagaagggaaccggtcgtggaatgcacggagatgaaaaaggttcatcttat
gatgtaatgggtttgcggcgatccaagcggcgatatgtacagcctgaacgttacttaggt
tgtggtgatttgcccgagacagatattgatgggactcgatttggttataaaacatacaga
ttggaatacgaagaaatgccattggcactatcaatccaggatgatcatgcatttagtttg
gatgatcattctgagcttgacgaaaggatccattcatatagaaaagagaattttttgagg
tggcaaagtaagatcaaatctagggaggtgaaattacttgtatgcagccaaaccgagcat
caaccacaacttgattatgaaataaaagatcaattgcaacttgctattgttcctgtgctg
cctgatgaaactgatcaaacggtccacgaagaggatcctcttgatgctgagattcctggc
aagtattcaggagacattgatgaagttgctaccaagtatatttacacaaattgtgcccct
agagtacataggaactgcacttcagagatagactttcctgatgctgaaggcagatggggg
tggaaagagtcacgtaagaaacgccaccgaagaagaagggataagttcaaattttcagaa
aaggagaattttcctgacttagcaatgtacagaaagggaccctttagtgcgggtatgtac
aaggaaatgataaggagatgtatggagaatataaaatcatcgatcaataaagagcaaccg
ttagttattgatcagtggaaagacttccaggcaggaaagttctcggatgaaagggacagc
agtgacgttccccaaaagaacgtggaagaagactcggaaattgaaatgctattcaaggag
atggaactttgcatggcatcagcatatattcttgaagacagtgagggtcccgatgttgaa
gtacctgctgagatttcacaaaatccaagtaagctctgggaacaattttgccgacatgaa
ttcaaactcaatgaagaaattggaattttgtgccaattatgtggctatgtgagcactgaa
attaaagatgtctctccaacctttttgcaatccacgagttcagttccaaacaagggtcca
cgcagtgaacaagattcagggcataagtcggatgaagatggtggggggcttgatctggta
tgcgttcctgcttcctccaacacacccttgtcagagggggaagataatgtgtgggcctta
atacctgatcttaaaaggaaattgcgcttccaccaaaagagagcatttgaatttctctgg
cgcaacattgctggttctgtagtaccggcagatatggaatcagcggtcaaggcaagaggt
ggttgtgttatctctcactctccaggggctggcaaaactttgcttatcatcgcatttctt
gtgagcttcttgaagttattccccggagcgaggcctttggtccttgctccaaaaacaaca
ctctatacctggtacaaggaaataattaagtgggaaattcctattccagtttatcaaata
catggtggtcaaacctacagaggtgaagtcaacaggcagaaatggagaatatgccctgga
gctccaaaacccaaccaagatgttatgcatgttttggactgcatggagaaaattcagaag
tggcttgctcacccaagtgtgcttctgatgggttatacctcttttctgacactgacgcga
gaagattcgaaatatagtcacagaaaatatatgggccaagtgttgcggcaaagtcccggg
attcttatacttgatgagggacacaacccaagaagcaccaaatcaaggttgaggaaggct
ttgatgaaggttgacacagatctgagaattttgctttcaggtacactatttcaaaacaac
tttggagagtactttaacaccctcactttggcaagaccaagatttgtcaaagaggtgtta
aaggaactggacccaaagttcaagaggagaaagaaaggtgccaaaacaaacttttcactc
gaaaacagagcgagaaaactcttcattgataaaatcggaaagaagatcgattcaagcgta
gcagatgaaagaacgaaaagtttgaacacattgaggaatttgacaggtggttttatagat
gtatatgagggtggaatctccgacaaccttcccggcttacaatgttacaccctgatgatg
aagtcaacaccttaccagcaagagcttctgacaaagcttcagaaccaaagaccggcgtac
aaaggatttcctctggaattggagcttctgattactcttgggtctatacatccttggttg
atccgaactactacttgttccaatcaatacttcagcatggaggtattggaggatcttgat
agatacaagtttgatttgaagtttggttcaaaagtgaggttcgtcatgagcctcatacct
cgatgtctcataaggaaagagaaagttctgatcttctgccacaacattgctccgattaat
ctatttcttgagatatttgaagcattctatgggtggaagaagggcgaagaagtgttggtt
cttcaaggggaccttgagctttttgaacgtggaagagtaatggataagttcgaggaacca
ggtggggcatcgaaggtaatgctggcttcgatcaatgcttgcgctgaaggcattagcttg
actgcagcatcgcgagtgatcttattggattccgagtggaatccttctaaaagcaagcaa
gctattgcgcgagcatttcggcccggacaagcaaaagaggtgtacgtgtatcagctcttg
gctacgggtaccttggaagaggaaaagcatagtagaaccacatggaaagagtgggtttca
agtatgatattcagcgaggagcaagtggaggacccgtctcactggcaagcagagaagatt
gaagacgacgtgctgagggagatcgtggaagaggaccgagctacgttgttccatatgatc
atgaagaatgagaaggcttcaaatgcagtagtcagaggtaaagactaa
DBGET
integrated database retrieval system
