Actinidia eriantha (wild kiwifruit): 130770070
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Entry
130770070 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130770070 isoform X1
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130770070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130770070
03400 DNA repair and recombination proteins [BR:
aew03400
]
130770070
Enzymes [BR:
aew01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
130770070
Messenger RNA biogenesis [BR:
aew03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
130770070
DNA repair and recombination proteins [BR:
aew03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
130770070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RQC
HTH_40
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-GeneID:
130770070
NCBI-ProteinID:
XP_057483338
LinkDB
All DBs
Position
28:9851651..9869287
Genome browser
AA seq
930 aa
AA seq
DB search
MELTLKKYFGYSAFRPYQKEIIENILQGKDCLVVMATGSGKSLCYQVPPLVVNKTAVVIS
PLLSLMQDQVMALRQRGIKADHLSSAQTDLSVQCNAEHGQFDILYMTPEKACSVSTSFWS
NLLGVGICLLAVDEAHCISEWGHDFRVEYKHLDKLRNILPNIPFVGLTATATEKVRIDIM
NSLKMRDPYVTIGSFDRTNLFYGVKSFNRSVSFVEELVEEVSKCVANAGSTIIYCTTIKD
VEQIFKSLLEAGIKTGIYHGQMDNKARQESHRSFIRDELHVMVATIAFGMGIDKPNIRYV
IHYGCPKSLESYYQESGRCGRDGIASMCWLYYTRSDFAKADFYCREASLENQRRAIKESL
MAAQRYCMLTTCRRKFLLDYFGEKYTSDKCGTCDNCTTSRKESDMSKEAFLLMACIQSCG
GNWGLNMPVDVLRGSRLCSKMLILAVLCASQSKKILNTHFDKLPLHGLGKELSANWWKAL
GYLLISDGYLTETVEDKFKFVSVSPKGLQFLRSSKPDNQPTLLLPVTSEMSGDEEYRNKL
SEFGEFNGLAPLKNEGLSEGEAQLYKMLLEERMKLARAVGTAPYAICGDQTLKKIALTRP
STNARLANIDGVNQHLLMKYGNHFIGSIKSLSQQLNLSLDGDASLQPIVTKPVMTTVPKT
ERKVTPAKFEAWKMWHEDGLSFLKVANFPGRPAPVKEETIFGYILDAAQEGCAIDWSRLC
QEIGLTCEIFTNIHAAISKVGKDKLKPIKNELPEEISYMHIKACLSMHDLRVSTEVIPPS
QPSCIRAREHSIQRSEVLPRSNHPSCMEGPCDYEKPVGNMIGHYFSERSGGEGLVPADNS
TSPKQPLVYTNDLLSSSKRQKVEASEEHSLALELTESSLLNWLKNYNDGVSPSDILEHFN
GSTEKLVLEMLSCLESEFSIFKKNNLYMLM
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atggaactcactctaaagaaatattttgggtattcggccttcaggccataccagaaagag
ataattgagaacattttgcagggaaaagattgcttggtggtcatggcaactggaagcgga
aagtcattgtgctatcaggttcctccattggttgtgaataaaacagctgttgtcataagc
cctcttttatctttgatgcaagatcaggttatggctttaagacaacgaggcattaaagcc
gaccatctctctagtgctcaaacagatttgagcgtgcaatgcaatgctgagcatggtcaa
tttgatattctgtatatgactccggagaaggcttgttccgtttctactagcttctggtca
aatttgctaggcgtgggtatttgtctattggctgttgatgaagcacattgcatttcagag
tggggccatgatttcagggtggaatacaaacatctagacaagttgcgcaatattcttcca
aatattccatttgttggcttaactgcaactgctactgaaaaggttagaattgacattatg
aattccctgaagatgagagatccttatgttaccattggctcatttgatcgcacgaatctc
ttctatggagtcaaatctttcaatcgtagtgtttcatttgtggaagaacttgtggaagaa
gtctctaaatgtgtggcgaacgctggttcaactataatatactgtacaaccatcaaagat
gttgagcagattttcaagtcgcttctcgaggcaggaatcaaaactggaatctaccatggc
caaatggacaataaagctcgtcaggagtcgcacagatcatttataagagatgaattgcat
gtcatggttgcgactattgcttttggcatgggtattgataagccaaacataaggtatgtg
atacattatggctgcccaaagagtttagagtcctactaccaggaaagcggacgatgtggt
cgagatggtattgcttctatgtgttggctttattatacaagaagcgactttgcaaaagcc
gacttctactgtagagaagcaagcttggaaaatcaaagaagagctattaaggagtcgtta
atggctgcacaacgttactgcatgctgacaacttgtagaagaaaatttttgctggactat
tttggggaaaaatatacatctgacaaatgtggaacttgtgataattgcaccacctcaagg
aaagagagtgatatgtctaaagaagcatttcttctaatggcttgcattcagtcatgtggg
ggtaattggggcctcaatatgcctgttgatgttcttcgtggatctcgattatgttccaaa
atgctgatactagctgtactttgcgcatcacagtccaagaaaattctcaacacacatttt
gacaagctcccacttcatgggcttgggaaagaattatcagcaaactggtggaaagcacta
ggttacctattaatttctgatggttatttgactgagacagttgaagataagtttaagttt
gtaagtgtcagtcctaaagggttgcagtttctgagatcttccaaacctgataatcaacca
acgttgcttctgccggtgacgagtgaaatgtctggcgacgaggaatacagaaacaaatta
agtgaatttggagagttcaatggtttggctcctctgaaaaatgagggtctttctgaggga
gaggcacaactttataaaatgctcttagaagagagaatgaagcttgcaagagctgttgga
actgctccgtatgctatatgtggtgatcaaacattgaaaaagatagcattgacaaggcca
tccactaatgctaggctagcaaacattgatggtgtcaaccagcaccttttgatgaagtat
gggaatcattttattggaagtattaaatctctatcccaacaactaaacctttctttggat
ggggatgcaagtttacaacccattgttacgaaaccagtgatgactacagtaccaaagaca
gaaagaaaagtaacaccagccaaatttgaagcttggaaaatgtggcatgaggatggtctc
tcatttctgaaagttgctaatttccctggtagaccggctccagtaaaagaagaaactatt
ttcggatatatccttgatgctgcccaagagggatgtgcaattgattggagcagactctgt
caggagattggtctaacatgtgagatatttacaaatatacatgctgccatctccaaagtt
ggtaaagacaagttgaagccaatcaaaaacgagttaccagaagagataagttatatgcat
ataaaggcatgtttgtcaatgcacgatttgagggtttcaacagaggtaattccaccaagt
caacctagctgcataagagcccgtgagcattctattcagaggtcagaagtactaccaaga
tccaatcatccatcctgcatggaaggaccttgtgattatgaaaaaccagttggaaacatg
attggtcattatttttcggagaggagtggaggggaaggtttggttcctgcagataatagc
acaagtccaaaacaacccctggtttacaccaatgatctgctttcatctagcaaacgccaa
aaagttgaagcatcagaagaacactctcttgcactggagttgactgagagttcattgtta
aactggcttaagaactacaatgacggagtttccccatctgatattttggagcacttcaat
ggatccacggaaaagttggtgcttgaaatgctgagctgcctcgaaagtgagttttcgata
tttaagaagaataacttgtatatgcttatgtaa
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