Actinidia eriantha (wild kiwifruit): 130770218
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Entry
130770218 CDS
T09464
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130770218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130770218
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
130770218
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
130770218
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Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
130770218
NCBI-ProteinID:
XP_057483559
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All DBs
Position
28:3082287..3093973
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AA seq
328 aa
AA seq
DB search
MRGLQVSLNQTQKIRLQRALEKLESLSSKTNRNASVTVADTIPVNYEDGVLKGHGTSELD
GEVVATLCGVVERVNKLVYVRALRARYKPEIGDIIVGRVIEVAPKRWRLEINFSQDAVLM
LSSMNLPDGIQRRRTALDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSQKYGKLERG
QLLTVPPYLVKRRKLHFHHIEQYGIDLILGCNGFIWVGEHVGAKDDMVVDQSSKSEQEDA
KSTTYPTSLEEQERTYTPLETRQNICRTANAVRVLSTLGFSINVEVIMETVNLSSSLNLD
IHEMLGAEFYVLVAEGEAERRSLKKKKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagagggttacaggtatcgttgaatcagacgcagaagattaggctccagagagctctc
gaaaagctggagtcattgtcctcaaagaccaaccgcaacgcctccgtcaccgtcgccgat
accatccccgttaactacgaagatggcgtcctcaagggacatggaacatcagaactcgac
ggtgaagttgttgccacactctgtggggtggttgaacgtgtgaacaaactcgtctatgtt
cgagccttgagggccaggtacaagcctgaaattggagacatcatcgtaggacgggttatt
gaggttgctccaaagcgctggagattggagataaattttagccaagatgcagtattgatg
ctttcttcaatgaacttacccgatggcatccagaggcggcgaacagcacttgatgaactc
aacatgcgaagcatttttgaagagaacgatgttatttgtgctgaagttcgtggtttccag
catgatggcagtttgcacctgcaagcaagaagtcagaagtatggaaagcttgagagaggc
caattgctaaccgtccctccttacctagtcaagaggcggaaactgcatttccaccacata
gaacagtacgggattgacctgatacttggctgtaacggattcatctgggttggtgaacac
gttggggctaaagatgatatggtagtggaccaatcgagtaaatccgaacaagaggatgcg
aaatccactacatatccaacgagtcttgaagaacaagaacgaacttacacaccgctggag
actaggcaaaacatatgcaggactgcaaatgctgttcgtgtcttgtctactttagggttc
agtattaatgttgaagtgatcatggagacagttaatttgagcagctcattaaatctcgat
atacacgagatgcttggggcagaattctacgttctggttgcagaaggggaggctgaacgg
cgtagcttgaagaaaaagaagggttaa
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