KEGG   Actinidia eriantha (wild kiwifruit): 130770396
Entry
130770396         CDS       T09464                                 
Name
(RefSeq) DNA ligase 1-like
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03030  DNA replication
aew03410  Base excision repair
aew03420  Nucleotide excision repair
aew03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    130770396
   03410 Base excision repair
    130770396
   03420 Nucleotide excision repair
    130770396
   03430 Mismatch repair
    130770396
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aew03032]
    130770396
   03400 DNA repair and recombination proteins [BR:aew03400]
    130770396
Enzymes [BR:aew01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     130770396
    6.5.1.6  DNA ligase (ATP or NAD+)
     130770396
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     130770396
DNA replication proteins [BR:aew03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    130770396
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     130770396
DNA repair and recombination proteins [BR:aew03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     130770396
   NER (nucleotide excision repair)
    Other NER factors
     130770396
   MMR (mismatch excision repair)
    Other MMR factors
     130770396
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase Ndc1_Nup
Other DBs
NCBI-GeneID: 130770396
NCBI-ProteinID: XP_057483850
LinkDB
Position
28:14014138..14034335
AA seq 797 aa
MFSLRSRPARHTILTRRLSLITLSRSLPPLIFSLFPPKAISFEPLVSPNPNPRAMSSRPS
AFDALMSGARAAAVKKKPQSSSSPKKRKTPESTTPNQNPKVAQNPAEQTLTSNSPLKPNS
TPSEEAQIANGFKKDQSKSPEETLAVKKPRLISADESIAKLKKKPANFDPKTAAFWEDGE
RVPFLFLVKAFDAIDKESGRIAITDIVCNMLRTVIATTPDDLLPVVYLLANKIAPAHEGV
ELGIGDASIIKALAEACGAKESQIKSKYQALGDLGLVAKASRSSQSLMRKPEALTVTKVF
DTFRLIAQESGKESQEKKKNHIKGLLVAATDCEPQYLIRLLQSKLRIGLAEQTLLAALGQ
AAVYAEKHSSPPGHIHSPFEEAAKIVKQVYSVIPVYDQLVPALLTGGVWSLSKTCGFTPG
VPIGPMLAKPTKGVSEILDKFQDMEFTCEYKYDGERAQIHYLENGSVEIYSRNAERNTGK
FPDVVVAISRLKKPSVTSFVLDCEIVAYDREKKRILPFQVLSTRARKNVVMSEIKVDVCI
FAFDILYLNGQPLLQEQLSVRREHLYKSFEEEPGLFQFATAITSNDLEEIQTFLESAVDS
CSEGLIIKTLSKDATYEPSKRSHNWLKLKKDYMDSIGDSLDLVPIAAFHGRGKRTGVYGT
FLLACYDSNNEEYQSICKIGTGFSEAMLEERSSSLRSKVIPKPRSYYRYGDSINPEVWFE
PTEVWEVKAADLTISPVHRAAVGIVDPDKGISLRFPRLLRVREDKSPEEASSSEMVAEMF
TAQKNNQRNNQEENEDD
NT seq 2394 nt   +upstreamnt  +downstreamnt
atgttttcattgcgctcacgccctgcacgccacaccattctcactcgtcgcctctctctc
atcacactctcccgttcactccctcctctcattttctctctcttcccgcctaaagccatc
tccttcgaacccctcgtctctccaaaccctaaccctagagccatgtcctctcgtccctcc
gccttcgacgctctcatgtccggcgcacgcgccgccgcggtcaagaaaaaaccccaatct
tcttcttcccccaagaagcgcaaaaccccagaatcaacaactcccaatcaaaaccctaag
gttgcccaaaacccagctgaacaaaccctaacttcaaattcccccttaaaacccaattca
acgccttccgaagaagcccaaatcgcaaatgggttcaagaaagaccaatcgaagtcacca
gaagagacattggcggtgaagaaaccgcgattgatctctgccgatgagagcattgctaaa
ttgaagaagaaacccgcgaatttcgaccccaaaacggctgcgttttgggaggatggcgag
cgagtgccgttcctgttccttgtgaaggcgttcgatgcgatagataaggagtcgggccgg
attgcgatcaccgatattgtgtgtaatatgctgaggactgtgattgcgacgaccccggat
gacttgcttccggttgtttatcttttggcgaacaagattgcgccggcccatgaaggagtg
gagctaggaatcggggatgcttcgattatcaaggcgcttgccgaagcttgtggggcaaaa
gaatcgcaaattaagagcaaatatcaggcattaggagacttgggccttgttgcaaaagca
agccgttcatctcaatctttgatgcgtaagcctgaagcattaacagtgaccaaggttttc
gatacatttcgtcttattgcccaggaatctggcaaggagagtcaagagaagaagaaaaac
catattaagggacttcttgttgcagccactgattgtgaacctcaatatctgattcggtta
ctccagtcaaaattgcggattggtttggcagagcaaaccctgttagctgcactggggcaa
gctgctgtatatgctgaaaaacattcatcaccacctggacatattcattcccctttcgaa
gaggctgcgaagattgttaagcaagtttattccgtgattcccgtgtatgatcaactagtc
cctgctcttcttactggcggcgtatggagtctttcaaagacatgtggtttcacaccaggt
gtaccaatcggacctatgttagcaaaaccaactaaaggggtttctgagatcttggataaa
tttcaggatatggagttcacgtgtgaatacaaatatgatggagagcgtgctcagatacat
tacctggagaatggttcagtggagatatacagtcgaaatgctgagcggaatactggaaag
tttcccgatgttgttgttgctatttcaagattaaagaaaccatctgtaacatcatttgtt
ctggattgcgaaattgtggcttatgatcgtgagaaaaagagaattctgcccttccaggta
ctcagtacacgtgctcgaaaaaatgtggtgatgagtgaaatcaaggttgatgtttgcata
tttgcttttgacatcttgtatctcaatggccaaccactattgcaggagcaacttagtgtt
cgtagagagcacctttacaagtcatttgaggaagagcctggactttttcagtttgcaaca
gctataacatcaaatgacctcgaagaaatacaaacgttcctagaatctgctgttgattct
tgttctgagggtttgattattaaaacattgagtaaagatgccacatatgagccctcaaaa
aggtctcataactggctaaaattgaagaaagactacatggacagtattggtgactcgtta
gatttagttcctattgctgcttttcatggccgggggaaacgtactggtgtttatggtacc
tttctgcttgcttgctatgacagcaacaatgaagaatatcaaagcatctgtaaaattggc
actggattctctgaagcaatgcttgaggagcgttcttccagtcttcgttctaaagttatt
cctaaaccaaggtcatactatcgctatggagattcaataaatccagaagtctggtttgaa
cccactgaggtgtgggaggtgaaagctgcagacttgactatcagtcctgtccatcgtgca
gccgttggcatcgtggatcctgacaagggcatttctcttcgatttccacgtctgcttcgt
gtccgagaagataaatctccagaggaggcgtcttcatctgagatggttgctgagatgttt
actgcccagaaaaataatcaaaggaataatcaagaagaaaatgaagacgactga

DBGET integrated database retrieval system