Actinidia eriantha (wild kiwifruit): 130770445
Help
Entry
130770445 CDS
T09464
Name
(RefSeq) vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
130770445
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aew04131
]
130770445
Membrane trafficking [BR:
aew04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
130770445
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Vps41
Beta-prop_Vps41
zf-RING_Vps41
Clathrin
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
zf_RING_Vps8
Beta-prop_HPS5
zf_RING_Vps8_fungal
WD40_Prp19
zf-RING_2
WDR55
Beta-prop_EML_2
ANAPC4_WD40
WDR90_beta-prop_4th
LepB_N
Beta-prop_WDR11_2nd
EIF3I
Motif
Other DBs
NCBI-GeneID:
130770445
NCBI-ProteinID:
XP_057483913
LinkDB
All DBs
Position
28:complement(13813179..13830791)
Genome browser
AA seq
952 aa
AA seq
DB search
MSPKPSENGIDGDDEREEEDSEEEEEEKEEDEDEPRLKYQRMGGSVPSLLASEAASCIAV
AERMIALGTHGGSVHILDFLGNQVKELPAHTATVNDLCFDIEGEYIGSCSDDGSVVINSL
FTDERMQFEYHRPMKAIALDPDYARKSSRRFIAGGLAGHLYFNMKKWIGYRDQVLHSGEG
PIHAVKWRTSLIAWANDAGVKVYDTANDQCITFIERPRGSPRPELLLPHLGWQDDTLLVI
GWGTSVKIASIKTNQNKGTNGTYRHIPMSSMNQVDIVASFQTSYFISGIAPFGDSLVVLA
YIQGEEDGEKEFSSSIPSRQGNAQRPEVRVVTWNNDELATDALPVHGFEHYKAKDYSLAH
APFSGSSYAGGQWAAGDEPVYYIVSPKDVVIAKPRDAEDHISWLLQHGWHEKALEAVEAG
QGRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVP
YIPTENPRLRDTAYEVALVALATNQSLHKDLLSTVKSWPPVIYSALPVISAIEPQLNTSS
MTDALKEALAELYVIDGQYEKAFALYADLMKEDVFDFIEKHNLHDAVCEKVVQLMMIDCK
RAVPLLTQHRDLINPSEVVSQLLAAGKKCDSKYFLHLYLHSLFVANPHAGRDFHDMQVEL
YADFDPKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNSKQALAIIINKLGD
IEEGIEFVSMQQDDELWEELIKQCLHKPEMVGVLLEHTVGNLDPLYIVNIVPNGLEIPRL
RDRLVKIITDYRTETSLRHGCNDILKTDCVNLLIKYYKEATRAIYLSNEEDEARAKRDEN
RASQSSERAPITRTMEVKSKTRGGGRCCICFDPFSIQNVSIIAFFCCHAYHTTCLSDSTI
SVSSSNKGAGVTSRETESYYEYGNGDVDEEDDDDDTSGGTRMRCILCTTAAG
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtctccgaaaccatcagagaacggcatcgatggcgacgatgagcgagaagaggaggac
tcggaggaggaagaagaggagaaggaagaagatgaggatgagccgaggctcaagtaccag
agaatggggggaagcgtgccttcgctcctcgcgagcgaagccgcctcgtgtattgctgtg
gcggagcgaatgatcgcgctcggcacacacggcggttccgttcatatccttgatttcctc
ggcaatcaagtaaaggaattacctgcccatacagcaactgtcaatgatctttgctttgac
atagaaggtgaatacattggaagctgttcagatgacggatctgttgtaataaacagtctt
tttactgatgagagaatgcaatttgagtatcatcggccaatgaaggcgattgctctggat
ccagattatgcaaggaaatcatccagaagatttattgctggtggtttagcaggtcattta
tattttaatatgaagaagtggataggctaccgtgaccaggttctgcactctggtgagggc
ccaattcatgcagtgaagtggagaacaagtctcattgcttgggctaatgatgcgggtgtc
aaggtctatgatactgctaatgatcagtgcataacctttattgagagacctcgaggaagc
ccacgtcctgagcttctgcttcctcacttaggttggcaggatgatactttattggtgatt
ggctggggaacatctgtgaaaattgcttcaataaaaacaaatcagaataaaggcactaat
gggacgtataggcatattccgatgtctagtatgaatcaggtggatattgtggcatcgttc
caaaccagctatttcatttctggaattgctccctttggggattctttggttgttctagct
tatattcagggagaagaagatggagagaaggaatttagcagcagtattccatcccgccag
ggaaatgctcagagaccagaagttcgtgttgtcacatggaataatgatgagcttgcaaca
gatgcactacctgtccatggctttgagcattacaaggcaaaagactattcccttgcccac
gctccgttctcaggtagcagctatgcaggtggtcagtgggctgctggtgatgagccggta
tactacattgtatccccaaaggatgtagttattgcaaaacccagggatgcagaagatcat
atttcatggcttcttcaacatggatggcatgaaaaagctttagaagcagttgaagctgga
caagggcggagtgagcttcttgacgaggtggggtcgagatatcttgaccatttgattgtg
gaaaggaagtatgctgaagccgcttctttatgtcccaaattgctgcgaggatccgcttca
gcatgggagagatgggttttccactttgctcatcttcgtcagcttcctgtactggttcca
tacataccaacagaaaacccaaggttacgtgatactgcttatgaggttgcccttgttgct
ttggcaacaaatcaatctttacacaaggatctcttgtcaactgtcaaatcttggcctcct
gtaatttattccgcccttcctgttatctcagccatagaacctcagcttaatacgtcatct
atgactgatgccctcaaagaggcgctagcagagttgtatgtaattgatggacagtacgag
aaagcttttgcactgtatgctgatctcatgaaggaagatgtatttgacttcattgaaaaa
cataacttacatgatgcggtttgtgaaaaggttgtccaactgatgatgatagattgcaag
cgtgcagtaccattgttgacccaacacagagacttgatcaatccatctgaagttgtttca
cagcttctggctgcggggaagaagtgtgattccaaatattttctacatttatatctgcat
tctctttttgtagctaacccacatgctggaagggatttccatgatatgcaggtggagctc
tatgcagactttgatccaaaaatgttgcttccatttcttcgcagtagtcagcattataca
cttgagaaggcatatgaaatttgtgtcaaaagggatcttttgagagagcaagttttcatc
cttggaagaatgggaaattcaaaacaagcgcttgcgattatcataaataagttgggggat
attgaagagggtatagaatttgtgagtatgcagcaagatgacgaactttgggaagaattg
ataaagcagtgtcttcataagcctgaaatggtgggagtgttgctggagcacactgttggc
aatctcgatccgctctatattgtcaacatcgtgccgaatgggttggagatacctcggttg
agggatcggctagtcaaaatcataacagactataggacagaaacttctcttagacatgga
tgtaacgatattctaaagactgattgtgttaacctgttgatcaaatactataaagaagca
acacgtgcaatttacttgagcaacgaagaagatgaagcacgtgccaaaagggatgaaaat
agggcttctcagtcaagtgagagggcaccgatcacgagaactatggaggttaagtcgaag
accagaggaggtggaaggtgttgcatttgttttgatccattctccatacaaaatgtatcg
atcattgcattcttctgctgtcacgcatatcacacaacttgtctttcggattctaccatt
tcggttagtagcagcaataaaggggctggagtcacttcccgggaaacagaatcatactat
gagtatggcaatggcgatgtcgatgaagaggatgatgatgatgatacttcaggtggcact
aggatgcgttgtatcttgtgtactacagctgccggttga
DBGET
integrated database retrieval system
