KEGG   Actinidia eriantha (wild kiwifruit): 130771671
Entry
130771671         CDS       T09464                                 
Name
(RefSeq) THO complex subunit 3
  KO
K12880  THO complex subunit 3
Organism
aew  Actinidia eriantha (wild kiwifruit)
Pathway
aew03013  Nucleocytoplasmic transport
aew03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aew00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    130771671
  09122 Translation
   03013 Nucleocytoplasmic transport
    130771671
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aew03019]
    130771671
   03041 Spliceosome [BR:aew03041]
    130771671
Messenger RNA biogenesis [BR:aew03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     130771671
Spliceosome [BR:aew03041]
 Complex C
  Other components
   EJC/TREX
    130771671
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    130771671
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 WD40_CDC20-Fz WD40 Beta-prop_WDR3_1st WD40_WDHD1_1st Beta-prop_EML_2 EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_Gbeta WDR55 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_Aladin Beta-prop_NOL10_N Beta-prop_WDR36-Utp21_1st Beta-prop_Vps41 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd eIF2A Beta-prop_TEP1_C DSE1_N Beta-prop_WDR35_TULP_N Beta-prop_EML Tricorn_2nd Beta-prop_WDR75_1st Beta-prop_EIPR1 NBCH_WD40 Beta-prop_HPS5 WD40_MABP1-WDR62_1st TRM82_WD WD40_RFWD3 Beta-prop_IFT140_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_IFT80_2nd PAC11 CFAP251_N Beta-prop_WDR41 WDR90_beta-prop_4th Beta-prop_WDR11_1st Beta-prop_ACSF4 WD_LRWD1 Beta-prop_SCAP CNH DUF7099 PSI
Other DBs
NCBI-GeneID: 130771671
NCBI-ProteinID: XP_057485310
LinkDB
Position
29
AA seq 313 aa
MEATIPLKNLHSREYQGHKKKVHSVAWNCIGTKLASGSVDQTARIWHIEPHGHGKVKDIE
LKGHTDSVDQLCWDPKHADLIATASGDKTVCLWDARSGKCSQQAELSGENINITYKPDGT
HIAVGNRDDELTILDVRKFKAIHKRKFNYEVNEIAWNMRGDMFFLTTGNGTVEVLAYPSL
QAVSTLMAHTAGCYCIAIDPLGRYFAVGSADSLVSLWDISEMLCVRTFTKLEWPVRTISF
NYTGEYIASASEDLFIDISNMQTGRSVHQIPVRAAMNSVEWNPKYNLLAYAGDDKNKYQA
DEGVFRIYGFETA
NT seq 942 nt   +upstreamnt  +downstreamnt
atggaggcaacaatacctttgaagaacctccacagcagagaatatcaaggccacaagaag
aaggtgcattcggtggcttggaattgcattggtacgaagctcgcgtctggttccgtcgat
caaacggctcggatttggcacatcgagcctcatggacatggtaaggttaaagatattgaa
ctgaaggggcacacagacagtgtggatcagttgtgctgggaccccaaacatgctgactta
atagcaactgcatcgggtgacaagacagtttgtctgtgggatgctcgaagtggaaaatgc
tcacagcaagcggaacttagtggcgagaatattaatatcacctacaagcctgatggtaca
cacattgctgttgggaacagggatgatgaactaacaatattggacgtacggaaatttaag
gccatccacaagcgcaaattcaattatgaggtaaatgagattgcatggaatatgagagga
gatatgttctttttgacaactgggaatggtactgttgaagtactagcatatccatctctt
caagcagtttccacccttatggctcatacagctggttgctattgcattgcgattgaccca
ttaggacgatattttgctgttggaagtgctgattccttagtcagcctttgggatatttca
gagatgctttgcgtgcgaacattcacaaaactcgagtggccagtgaggacgataagcttc
aattatacgggagaatatattgcttctgccagtgaagacttgttcatcgatatatccaac
atgcaaaccggacgatcagtccaccaaattcccgttcgggctgccatgaacagtgtggaa
tggaatcctaaatacaatttgcttgcatatgctggagatgataaaaacaaatatcaggct
gatgaaggtgttttccgaatatatggcttcgagactgcatag

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