Actinidia eriantha (wild kiwifruit): 130771749
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Entry
130771749 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: U4/U6 small nuclear ribonucleoprotein Prp31 homolog
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130771749
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aew03041
]
130771749
Spliceosome [BR:
aew03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
130771749
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
130771749
NCBI-ProteinID:
XP_057485398
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Position
29:complement(5015099..5020510)
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AA seq
484 aa
AA seq
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MATLADSFLADLDELSDNEADIPEEDNLDAENMEEDVDGDLADIETLNYDDLDSVSKLQK
TQRYIDIMQKVEEALEKGSDMSNHGIVLEDDPEYQLIVDCNALSVDIENEIIIIHNFIRD
KYRLKFHELESLVHHPIDYARVVKKIANEMDLTLVDLEGLLPSAIIMVVSVTASTTSGKP
LPEDVLQKTVDACDRALALDSAKKMVLDFVESRMGYIAPNLSAIVGSAVAAKLMGTAGGL
SALAKMPACNVQLLGAKKKNLAGFSTATSQFRVGYIEQTEVFQSTPPSLRMRACRLLAAK
STLAARVDSTRGDPTGKTGRTFREEIRKKIEKWQEPPPAKQPKPLPVPDSEPKKKRGGRR
LRKMKERYAITDMRKLANRMQFGVPEESSLGDGLGEGYGMLGQAGSGKLRVSVAQSKLAA
KVSKKFKEKPYGSSGATSGLTSSLAFTPVQGIELSNPQAANQLGSGTQSTYFSEIGTFSK
IKRT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggcaactcttgcggattcttttcttgccgaccttgatgaattgtctgacaatgaagcc
gatattcctgaggaagataatcttgatgcagaaaatatggaagaagatgttgatggggac
ttggccgatatagaaacccttaattacgatgatctggacagtgtctcaaaattgcaaaaa
acacagcgttacatagatattatgcagaaagttgaagaagctcttgagaaagggtctgat
atgtcaaatcatggcatcgtccttgaagatgatcctgaataccagctgatagtagattgt
aatgcattgtcagttgacattgagaatgaaattattattatccacaattttatccgggac
aagtaccgcttgaagttccatgagctggaatcacttgttcatcacccaatcgattatgct
cgagtagttaaaaagattgctaatgaaatggacttaacccttgttgatttggaagggctt
ctaccctcggccattattatggttgtttctgtcacagcatcaaccactagtggtaaacca
cttccagaggacgtcctacagaagacagttgatgcgtgtgatagagctcttgctcttgat
tcagcaaagaaaatggtccttgattttgtggagagtagaatgggatatattgctccaaat
ctttctgcaattgtaggtagtgcggttgcggcaaagcttatggggactgctggtggtcta
tcagcattagctaagatgcctgcttgcaatgtgcagcttcttggtgcgaagaaaaagaac
ttagctgggttttcaactgcaacatcccagttccgtgttggttatattgagcaaacagaa
gtttttcagagcacacccccttctctgagaatgcgtgcttgccgactactggctgcaaaa
tcgacgcttgcagcacgtgtagattctacgagaggggatccaactgggaagactgggaga
acttttcgagaagagattcgtaagaaaattgagaagtggcaagagccaccccctgcgaag
caacccaaacctcttccagttcctgactctgaaccgaaaaagaagagaggtggtcgtcgg
ttgaggaagatgaaggaaagatatgctatcacagacatgaggaagctggcaaataggatg
cagtttggagttccggaagaaagctctttaggtgatggactgggagaaggatatggaatg
ctaggtcaggctggcagtggcaaattgcgtgtatcagttgcccagagtaaacttgctgca
aaagtgtctaagaagtttaaggagaagccctatggaagcagtggtgctacatcaggactg
acttcaagtttggcctttacaccagtgcagggaattgagctgtcaaatccccaggccgcc
aaccagcttggtagtggaactcaaagtacctacttctcagaaatagggacattttcaaag
attaagaggacctga
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