Actinidia eriantha (wild kiwifruit): 130771775
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Entry
130771775 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC130771775
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
130771775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aew03009
]
130771775
Ribosome biogenesis [BR:
aew03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
130771775
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR90_POC16_2nd
Utp12
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_ACSF4
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
WDR90_beta-prop_4th
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WD40_MABP1-WDR62_1st
CFAP251_N
WD40_Gbeta
Beta-prop_Vps41
PQQ_2
BBS1
Beta-prop_VPS8
NBCH_WD40
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
130771775
NCBI-ProteinID:
XP_057485436
LinkDB
All DBs
Position
29:complement(14404021..14413688)
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AA seq
625 aa
AA seq
DB search
MSSSNIRDLLTSFSPSLDFFAISSGDDRIKIWDTVKGQIQTEFADIVSTGGTNLFGKPEK
GHLSVDFTCMKWLSLDKKRKRKLGSSLLVLGTGSGDVLALDVSAGQLKWKVNDCHPGGVS
AISLTTHDSYIYTAGADGIVCKLDSITGNLLGKYRASAKAISSMSVSSDGKILATAAAQL
KVFNCSDHTKMQKFSGHPGSVRCMVFTDDGKCILSSAISERYIALWKLDGGKNQSACCFL
AMDHPAVFLDSRCVDAGDVDASGLYVVAISEMGICYFWYGKNIEELRNAKPTKISLSLND
QFSKSQKVPTIFAVKLQGTAKPGSAHIFLAYGLVIKPSFEKVIVHSGSDVKLNSSTDGIL
LPICQSRKSKKGSNSHKEVSVLDRANAEDAILPIPKVLDFHHKRKKHQNSAIVPDEVMAD
DVANDKRGAQAKEEKDDMEKAGHPPTICMEDRLRTLGILDNKDDLTSDSVFDSIKSRGIN
IEANMLKRRFMRTVILSMVPSDAYKLLEVLVAGWQARSHRGKYVLPWICCILVNHGDYII
SQEPVTQLLDSLHKFTKSKGTAIQSLLQLSGRLQLVTAQIDKAVQNEGDTYLDDHQMEES
EDDEVDEVLYGEEDDXSQSNSDIDD
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgagctcctcaaatataagagacctcttgacctcgtttagtccctctttggacttcttc
gctatcagttctggagatgatcgaattaagatttgggacactgtgaagggccaaatccag
actgagtttgcggatattgtttcaactggtggaactaatttatttggtaaaccagaaaag
ggtcacctttctgttgacttcacttgcatgaagtggttgtctttagataaaaagagaaaa
cggaaacttggaagttcattgttggtattgggaacgggtagtggtgacgtactagcactg
gatgtatctgctggtcaattgaagtggaaagttaatgattgccaccctgggggtgttagc
gccatttcattgacaacacatgattcatacatttacacagcgggtgcggatgggatagtt
tgcaaactagattcaattacaggaaatttgttggggaagtacagagcttctgcaaaggca
atctcttctatgtctgtttcatcagatgggaagatattagccactgcagctgctcagctg
aaggttttcaattgttcagatcacacaaagatgcagaagttttcaggccatccgggatct
gtccgctgtatggtcttcaccgatgatgggaaatgcattctttcttctgctatttctgaa
cgttatattgcactttggaaactagatggtggcaaaaatcaatcagcttgctgttttctt
gcaatggaccaccctgctgtttttctggatagcaggtgcgttgatgctggggatgtagat
gcttcaggtctttatgtcgtggccatctcggaaatgggaatttgctatttttggtatgga
aagaatattgaggaattacgcaatgccaagccaacaaaaatttccctctctctcaatgac
caattctctaagagtcagaaggtacctactatatttgctgtgaaactacaaggaactgcc
aaacctggctctgcccacatatttttggcctatggtttggtaataaagccgtcatttgag
aaagtcatagtccattctggctcagatgtaaaattaaacagttccacagatggaatcctt
ctacccatctgccagtcccgcaaatctaaaaaggggtcaaattcacataaagaagttagt
gtgctagaccgtgcaaatgcagaagatgccatacttccaattcccaaggttctagatttt
catcacaaaaggaaaaaacatcaaaattcagctattgtgcctgatgaggtaatggctgat
gatgtggccaacgacaagaggggagctcaggccaaggaagagaaagatgacatggaaaag
gcgggacaccctcctactatttgcatggaggaccgtctcaggaccttaggcatacttgac
aataaagatgatcttacatccgactcggtatttgattcgataaagtcaaggggcataaat
attgaagctaatatgctcaaaagaaggtttatgaggacagttattttgtccatggtaccg
agtgatgcttacaaattactggaagtcttggttgccgggtggcaggcaagatcacacagg
ggaaagtatgttcttccctggatttgttgtatattggtgaatcacggtgattacatcata
tctcaggaaccagtgacccagttactggattccttacacaagtttaccaagtccaaaggc
acagctattcagtctttattgcagttgtcaggtcgtttgcaacttgttacagcacagatt
gataaggcggttcagaatgaaggtgatacctatttggatgatcaccagatggaagaaagt
gaagatgatgaggttgatgaagttctttatggtgaagaagatgattaatcccaaagtaac
agtgatattgatgactag
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