Actinidia eriantha (wild kiwifruit): 130772019
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Entry
130772019 CDS
T09464
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03013
Nucleocytoplasmic transport
aew03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130772019
03015 mRNA surveillance pathway
130772019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aew03019
]
130772019
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
130772019
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
130772019
NCBI-ProteinID:
XP_057485736
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All DBs
Position
29:19323878..19335513
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AA seq
414 aa
AA seq
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MPKPGRGRPATPSASGSGSSRSRSRSRSGTGSDSRSSSRSRSRSLSSSSVSRSASSRSRS
PPIQRKSPAEGAKRGRSPPPQSKKPSPPPRKTSPMLESLVLHVDQLSRNVNEAHLREIFS
NFGEIVNVQLVMDHAVNLSRGYGYVEFKARVDAEKAQTYMDGGQIDGNVVRAKFTLPERK
KVSPPPKVVATASKKDAPKADNVGADVEKDGPKRQRETSPRRKPHSPLRRRSPIARRGGS
PRREPDSPPRRRVDSPVRRRGESPYRRGETPPRRRPASPGRGRSPSSPPRRNTSSARVSP
PRRIRGSPVRRRSPLPPRRRSPPRRARSPPRRSPINRRRSRSPIRRPVRSRSRSVSPRRG
RPPVPRRGRSSSYSGSPSPRKVARKVSRSRSPRRPLRGRSTSNSSSSSSPPRKP
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaaccaggccgaggtcgtccggctactccgtcagcgtctggttcaggatcgtct
cgctctcgttctcggtctagatccggcactggttcggattctcgctccagctcgcgatcc
cgatctcgatctctgtcttcttcttccgtgtctcgcagcgccagttctcgcagccgaagc
ccccctatccagagaaaaagtcctgctgaaggagccaagcgaggtcggtcaccaccaccg
caatctaagaaaccgtctccacccccaaggaaaacttctcctatgctcgagtcccttgtt
cttcatgttgaccagctcagcaggaatgtgaatgaagcccacctaagagaaatattcagt
aattttggagagattgtaaatgtccagttagtaatggatcatgctgttaatctttcaaga
ggatatggatatgttgagttcaaggcaagagttgatgctgaaaaggcccagacatacatg
gatggtggccagattgatgggaatgttgttcgagcaaagttcactttacctgagcgaaag
aaagtatcacctccacctaaggtggtggccactgcgtcaaagaaagacgctccaaaagct
gataatgttggtgctgatgttgaaaaggatggaccaaagcggcaaagagaaacttcccct
cgtcgcaagcctcattcgcccttgcgtaggagatcacctattgctcgaagaggtggatcg
ccaagacgagagccagactctcctccgcgtcgacgtgtggactctcctgttcgtcgtcga
ggagaatctccttaccgccgtggtgaaacacctcctaggaggaggcctgcatctccagga
agaggtcgttctccttcctctccacctagaaggaacacatcatctgcaagggtctcaccc
ccgcggaggatacgtggcagtcctgtccgaaggcgctctcctcttccaccaaggcgccgc
tcccctcccagacgagctcgaagtccgcccagaaggtctcctattaatcgtagacgcagc
cgctctcctattcgaaggcctgtgaggtcacgttcaagatcagtctctccaagaagaggc
cgaccgccagttccaagacgtgggaggtcgtcatcatattccggatcacctagtccacgc
aaggtagctcggaaggtatcgaggagccgcagtccaagaaggccactgagagggagaagc
actagcaacagcagcagcagtagttctccacctcgtaagccatga
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