Actinidia eriantha (wild kiwifruit): 130772318
Help
Entry
130772318 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130772318 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
130772318
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aew03000
]
130772318
03019 Messenger RNA biogenesis [BR:
aew03019
]
130772318
04121 Ubiquitin system [BR:
aew04121
]
130772318
Enzymes [BR:
aew01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
130772318
Transcription factors [BR:
aew03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
130772318
Messenger RNA biogenesis [BR:
aew03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130772318
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
130772318
Ubiquitin system [BR:
aew04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
130772318
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
zf-UDP
Baculo_IE-1
DUF6792
Rtf2
Motif
Other DBs
NCBI-GeneID:
130772318
NCBI-ProteinID:
XP_057486049
LinkDB
All DBs
Position
3:17761944..17772610
Genome browser
AA seq
935 aa
AA seq
DB search
MSNEGEKKCPLCAEEMDWTDRQFNPCKCGYKVCVWCWHHIMDMAEKDETEGRCPACRTPY
DKEKIVAMEANCQRVVSTKKEQKSKPQKPKLKKPEVSKDLTSVRVIQRRMAYVIGLPLRL
ADENLLQRKEYFGQYGKVTKVALSRTAGGAIQQFVNDTCSVYVTYSKEEEAIRCIQSVHG
FVLEGSFLRASFGTAKYCHAWLRNTPCTNSACLYLHSIGADEDSFSKDEEAAVHTRNRVH
QIVGATHNMQRLSGNMLPPPIDDPFNSSRVGTDKAAQRDITHSTVNSNGLLTCSHSSKDK
DGCIKTPNRTFVDIVGGSSSGPEKDGSVAEERKILNLCSDFSSVTMDEGNHLETQYSNSM
LCKVSSLGHLPIGLARDKDFQGYFKPFRECSKFSVLGGADFTSGDPCIVKGQSCLMSDSE
KQVWPGSCSDVREDLLSFDDQRLKGSDSLSQESSVLASSYPIRISDCSNGHVQQRKDSHS
LSDYDLEHSTVHNHVDEASISFTYVNSVPIDGYSERKFQSFTESDRNFRSCSEREFQSFT
ESDRNFRSCSERKFQSFAESDRNFRSCKSFSNEEMVEQLRRLDDDNITNDGDSSALNVVE
SSIISNILSMDFDACDDSLTSHGLADLFDGTGGRHGPWNFRKSDESRFSFAKKENSENQE
TVFDSSLSNIGQVSKKYSSFPDSMENKEHYFGGPRHHVSRAQRSTPPGFSVPSREPSPGF
SARERTNQVFSASSGSNLVKTSSLANNQFYARSAGNMNNAHDFDFMDPAVLAVGRGKSTN
MLNNSGFEARSTSTPQPTTYEDEAKLWHLMQQSGSYHQDPKYSLMFSQENQSANRERGFS
SHNGNWFSAMDDTYGYSSMLMDQQQTYNPNPFPGTQLSQQIYGNGHISNGYCPGLDKAEI
PRNERIGLNKYYPGYGDLMLQMPGTGDVYNRVYGL
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgaaggagagaagaagtgtccactatgcgccgaagaaatggactggacggat
cggcaatttaatccctgcaaatgtggttataaggtgtgtgtttggtgttggcatcatata
atggacatggctgagaaagatgagactgaggggcgatgtcctgcatgccggacaccttat
gacaaggaaaaaattgtggcgatggaagcgaactgtcaaagggtggtgtcaacaaagaaa
gaacaaaaaagtaaaccacagaagcctaagctgaaaaaacctgaagtaagtaaggaccta
actagtgttagagtgatccagcggagaatggcatatgtaatcggacttcctcttaggcta
gctgatgaaaatcttctccagcggaaggaatattttggtcaatatggaaaagttacaaag
gttgccctatctcggacagcaggtggggctattcagcaatttgtcaatgacacttgtagc
gtatatgttacttactcaaaagaggaggaggccatacggtgtattcaatcagtacacggt
tttgtcctggaaggtagttttttaagagcatcgtttggaactgcgaagtattgccatgca
tggttgagaaacacgccttgcaccaattctgcttgtttatatttacatagcattggtgct
gatgaggatagtttcagtaaagatgaagaagctgcagtgcatacaaggaatagagttcac
caaattgtgggtgctacacataatatgcaacggctctcggggaatatgttgcctccgcca
atagatgatcccttcaatagcagtagagttggtactgataaagctgcccaaagagacata
actcattctacagtaaattccaatggcctcttgacttgttcacattcttctaaagacaag
gatggatgcattaaaacgcctaacagaacttttgtagatattgtcggaggttctagttca
ggtccagaaaaagatggtagtgttgctgaagagaggaagatattaaacttgtgctctgat
ttctcttcagtaaccatggatgaaggcaatcatcttgagactcaatattcgaattctatg
ctatgtaaggtttcatctttgggacatctgcccattggactagccagggataaagatttt
caaggatatttcaaaccatttagagaatgttcaaaattttcagttttggggggagctgat
tttacatccggtgatccgtgcattgtgaaaggacaatcttgtttgatgtcagactcagaa
aaacaagtatggcctggttcatgcagtgatgtgagagaagatttattatcttttgatgat
cagagattgaagggttctgacagtttaagtcaggagtcctctgtgcttgcttcatcttat
ccaattaggatttctgactgttctaatggtcatgttcagcagcgtaaagactctcacagt
ttgagtgattacgacttggagcatagcactgtacataatcacgtcgatgaagcttctata
tcatttacatatgtaaattcagtacctattgatggatacagtgagaggaaattccaaagt
tttactgaatcagatagaaattttagatcttgtagtgagagggaattccaaagttttact
gaatcagatagaaattttagatcttgtagtgagaggaaattccaaagttttgctgaatca
gatagaaattttagatcttgtaaatcgttctccaatgaggaaatggtggaacaattaaga
aggcttgatgatgataatatcactaatgatggtgacagttctgcattaaatgtggtcgaa
agcagtataatatcaaatatcttgtcgatggattttgatgcatgcgatgattccttgaca
agccacggcttagctgatttgtttgatggaactggtgggcggcacgggccttggaatttt
cgtaagagtgatgaatccaggttctcatttgcaaaaaaagagaattccgagaatcaagaa
actgttttcgactcgtctctcagtaacattggtcaggtctcaaagaaatactcttccttt
ccagattccatggaaaataaggagcactactttggtgggccacggcatcatgtatccagg
gctcaaaggtcaactccaccaggattttcagtgccatccagagaaccatctccgggcttt
tctgcacgtgagagaacaaaccaggttttcagtgcctcctcagggagtaatctggtcaag
acctcttccttggcaaacaatcaattttatgcacggtcagcaggaaatatgaacaatgct
catgactttgattttatggatcctgctgtattagctgtcggtaggggtaaatcaacaaac
atgttgaacaattcgggcttcgaagcaagatcaacttctactccgcagcctaccacctac
gaagacgaggcaaaactgtggcacttgatgcaacaatccggatcttaccatcaggaccca
aaatattctctgatgttctctcaagagaaccaatctgctaatcgggagcgcggtttttcc
agtcacaatgggaattggttttctgccatggatgatacgtatggttactcttcgatgctt
atggatcaacaacagacctataaccctaacccatttcctggtacacagttgtctcagcag
atatacggaaatgggcacatttcaaatggatattgcccaggtctggacaaggctgaaatt
ccgagaaatgagagaataggtttgaacaagtactatcccggatacggggatttaatgttg
cagatgcccggcacaggtgatgtatacaatagagtatatgggttgtaa
DBGET
integrated database retrieval system
