Actinidia eriantha (wild kiwifruit): 130772468
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Entry
130772468 CDS
T09464
Name
(RefSeq) ubiquitin receptor RAD23c-like isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03420
Nucleotide excision repair
aew04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
130772468
09124 Replication and repair
03420 Nucleotide excision repair
130772468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
aew03051
]
130772468
03400 DNA repair and recombination proteins [BR:
aew03400
]
130772468
Proteasome [BR:
aew03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
130772468
DNA repair and recombination proteins [BR:
aew03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
130772468
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Dsc3_N
Rad60-SLD_2
CUE
UBA_RAD5A
TECR_N
UBA_3
Ubiquitin_5
NQRA_N
Ubiquitin_4
Motif
Other DBs
NCBI-GeneID:
130772468
NCBI-ProteinID:
XP_057486290
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Position
29:complement(6844518..6858602)
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AA seq
386 aa
AA seq
DB search
MKIFVKTLKGTHFDIEVKPEDTVADVKQNIESVQGADVYPAPQLMLIHQGKVLKDGTTLE
ENKVAENSFVVIMLTKNKSSSGEGSATSTAPTAKTPQTSSPPSTTATQAPAVTPAPPAPV
PLPAPAAAPVSLVTAGSESDVYGQAASNLVAGSNLEGAIQQILDMGGGTWDRETVVRALR
AAYNNPERAVDYLYSGIPEQAEVPVVAPAPVSGLAANSPSQPPQPAQPEPVASSGPNANP
LDLFPQGLPNMGSNVAGAGTLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPQLVR
LIQEHQADFLQLINEPGEGGEGNILGELAAGMPQAVTVTAEEREAIERLEAMGFDRAIVL
EVFFACNKNEELAANYLLDHMHEFEE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgaagattttcgtcaaaaccttgaagggaacccacttcgacatcgaagtaaaacccgag
gatacggttgctgatgtcaagcaaaacatagaatctgttcaaggagcagatgtgtatcct
gctccacaactgatgcttattcatcaagggaaagttctaaaagatggcacaacattggaa
gaaaacaaggttgctgaaaatagttttgtagtgatcatgttaactaagaataagagctca
tctggtgaaggttcagccacatcgactgcacctacagctaagacaccacagacaagctcc
ccaccttctactacagccactcaagctcctgcagtaaccccagcaccccctgcacctgtt
cccttgcctgcacctgctgcagctcctgtctctttagttactgctgggtcagagtctgat
gtatatggacaagcagcgtcgaatctggttgctggtagtaaccttgagggagctatccag
caaatacttgacatgggtggagggacttgggatagggaaactgttgttcgtgctcttagg
gctgcctacaacaacccagagagagctgttgattatttatattctggtatccctgagcaa
gccgaagttccagttgtggccccagcccctgtgagtggtctggctgcaaactctccatct
cagcctccacaaccagcgcaaccagaacctgttgcttcaagtggacccaatgctaaccca
ttggatctcttcccccagggcctgccaaacatgggttcaaatgttgctggtgcaggaacc
ctggattttctacgcaatagtccacagttccaagccctacgagctatggtgcaggctaat
ccacaaatcttacagcccatgcttcaggagctagggaagcaaaaccctcagttggtgagg
cttattcaggagcaccaggccgatttccttcagctgatcaatgaacctggggaaggtgga
gaagggaacatactgggggaactagctgcaggaatgccacaggctgttacggttacagct
gaggagcgtgaagccatagagcggcttgaagcaatgggttttgatcgggcaattgtactg
gaggtgttctttgcttgcaacaagaatgaggagctggccgctaactaccttttggaccac
atgcatgaatttgaagagtaa
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