Actinidia eriantha (wild kiwifruit): 130772478
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Entry
130772478 CDS
T09464
Name
(RefSeq) uncharacterized protein LOC130772478 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
aew
Actinidia eriantha (wild kiwifruit)
Pathway
aew03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aew00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
130772478
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aew03021
]
130772478
03041 Spliceosome [BR:
aew03041
]
130772478
03036 Chromosome and associated proteins [BR:
aew03036
]
130772478
Transcription machinery [BR:
aew03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
130772478
Spliceosome [BR:
aew03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
130772478
Complex B
130772478
Complex C
U2 SnRNP specific factors
130772478
Chromosome and associated proteins [BR:
aew03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
130772478
TFTC complex
130772478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_2nd
Beta-prop_RSE1_1st
CPSF_A
REV
Motif
Other DBs
NCBI-GeneID:
130772478
NCBI-ProteinID:
XP_057486308
LinkDB
All DBs
Position
29:complement(2305898..2344343)
Genome browser
AA seq
1408 aa
AA seq
DB search
MAVSEEESSSAKSRSASNGVHYLAKCVLRGSVVLQVVQGHIRSPSSNDVVFGKETSIELV
IVDDDGITQSICEQPVFGTIKDLAILPWNEKFHARSPQMMGKDLLVVISDSGMLSFLTFS
NEMHRFFPLQHIPLSAPGNSRYQVGRMLAVDPYGCFIAASAYEDRLSMFSVSMSAGSDII
DKRIFYPSDNEGDTSTSRGPTSICGTIWSMCFISNNFHHPSKEHSPVLAILLNRMGSFLN
ELLLLEWNTREQAVHVISQYAEAGPLAHDVVEVPHSYGFAILFRVGDALLMDLRDVHNPC
CVYRITLPASVEEHDFVEADEIFNVAASALLELGDVRKDDDPMSIDGESGNGKSNSSYVC
SWSWEPGNGKNPRMIICVDSGEFFMIKVSSDSDGPSVDMSECLYKGLPCKALLWVEGGLL
AALVEMGDGMVLKLEDGRLLCRSPIQNIAPILDMSVMDYHDEKHDPVFACCGKAPEGSLR
IIRSGISVEKLLRTAPIYQGMTGTWTLKMKLTDSHHSFLVLSFVEQTRVLSVGLSFTDVT
DMVGFQPDVCTLACGLVGDGLLAQIHQNAVRLCLPTAAAQADGIPSSSPICTSWSPDNIT
ISLGAVGHNLIVVSTSSPSFLFILGVRYLSACHYEVYEMQHVSLQNELSCMSIPQKHFKQ
KLLTSCSNMGDKSLVDTLPDGVDIGSTFVIGTHKPSVEVLSFLPNKGLRVVALGAISLTN
TMRTAISGCVPQDVRLVLVDRLYVLSGLRNGMLLRFEWPTASTMSSFVSSSQRPCSSSCL
LTPDAFLLKAIGPHIHALGLSEKAKDNPVHLQLIAIRRIGITPAFLIPLSDALDADVIAL
SDRPWLLHTARHSLSYTSISFQPSSHVTPVCSVECPKGILFVAENCLHLVEMVHTKRLNV
QKFHLGGTPRKVLYHSESRLLLVMRTELSHDSYSSDICCVDPLSGSVLSSFRLDPGETGK
TMDLVRVGNEQVLVVGTSQSSDPVIMPSGEAERRRKENPSLSLSQEEGKKTLDRRRRNQR
RRRRRRRKPLSSTKGRLIVLCLENMHNSDSGSMTFYSKAGSSSQQTSPFHEIVGYAAEQL
SSSSLCSSPDDNSCDGIKLEETESWHLRLACSTIWSGMILAVCPYLDRYFLASAGNAFYV
CGFPNDNPQRVRRFAVGRTRFMIMTLTTHFTRIAVGDCRDGILFYTYHEDARRLDQIYCD
PFQRLVADCILMDIDTAVVSDRKGSITVLSCSNQLEDGASPECNLTRSCSFYMGEIAMSI
RKGSFSCKLPADDIMKGCDVANTIIGNSIMASTLLGSIVVFIPISREEYELLEVLQSRLV
VHPLTAPILGNDHNEFRSRQCSAGVPKILDGDMLAQFLELTSMQQEAVVALPLGSPDTVM
FSSKSSSPAPITVNQVVRLLERVHYALN
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctcggaggaagagtcttcatcggccaagtctcgatcagcctccaatggcgtc
cactatctcgccaagtgcgttctcagaggtagcgttgttctacaggttgtccaaggccac
attcgttctccttcctccaacgacgtcgtctttggcaaggagacatctattgaattggtg
atagttgatgatgatggaatcacccaatctatctgtgagcagcctgtatttggcacaata
aaagatcttgccattctaccatggaatgagaagttccatgctagaagcccacagatgatg
ggaaaagaccttctggttgttatctctgattctgggatgctttcatttctcacgttttct
aatgaaatgcacaggtttttcccattgcaacacattccactttctgctcctggcaactca
aggtaccaggttggaaggatgctagctgttgatccatatggctgcttcattgctgccagt
gcatacgaggatcgattgtctatgttctcggtttcaatgtctgctggaagtgatatcatt
gataagagaatattttatccttctgataatgaaggggacacaagtacttccagagggccc
accagtatttgtggtaccatatggagtatgtgctttatttccaacaattttcatcaccca
agtaaggagcacagccctgtattagccattctactgaataggatgggatctttcctgaat
gagctcttgttattggaatggaatacgcgggaacaggctgttcatgttatttctcagtat
gctgaagctggacccctagcacatgatgtggttgaagttcctcattcttatggatttgcc
attctgttcagagttggtgatgctctcttaatggatctcagggatgttcacaacccttgt
tgtgtctatagaataactttacctgcttcggttgaggaacatgattttgttgaagctgat
gaaatatttaatgttgctgcctctgctttactggaactaggggacgtgcgtaaagatgat
gatcccatgagtatagatggagaatctggcaatggcaaatcaaattcgagctatgtgtgc
tcctggagctgggaaccaggaaatggaaaaaatccaaggatgattatttgtgttgatagt
ggagaattttttatgattaaagtttcttctgattctgatggaccaagtgttgatatgtct
gaatgtctctacaaaggtctgccatgcaaagcacttttgtgggtcgaaggtggattgttg
gctgcgcttgttgagatgggggatggaatggtgttgaagttggaagatggaaggctactt
tgcagaagtcctattcaaaacatcgcacctatcttagatatgtcagttatggattaccat
gatgagaaacacgatccagtgtttgcctgctgtgggaaggccccagagggttctttgagg
attattcgaagcggcattagtgtagaaaagcttttgagaactgcgcctatctatcaaggc
atgactggtacttggacactaaaaatgaaattaactgattctcatcattctttcctagtg
ctatcatttgttgaacagacacgggttctatcagttggcttaagctttacagatgtgact
gatatggttggtttccagcctgatgtttgtaccttggcatgtggccttgtgggcgatggt
ttactggcccagatacaccaaaatgcagttagactttgtttgcctactgctgccgctcag
gctgatggtattccatcatcatctccaatatgtacatcctggtcccccgataatatcact
atcagtctaggggcagttggacataatttaattgttgtatctacttccagtccaagcttc
ttatttattcttggggtcagatatctatcagcatgtcattatgaagtatatgagatgcaa
catgttagtttgcagaatgaattatcctgcatgtctatccctcagaagcattttaagcaa
aagctattgacttcttgcagtaatatgggggacaagagtcttgtagatacccttccggat
ggagtggacattggtagtacctttgttattggtacgcataagccttcagttgaagttttg
tcttttcttcccaataaaggtctaagagttgtcgctttaggggccatttctttaacaaac
actatgagaactgctattagtggctgtgtccctcaagatgtaaggcttgtattagttgat
cgactttacgttctttcaggattgaggaacggaatgcttctccggtttgagtggcctact
gcctccacaatgtcctcatttgtatcatccagtcagagaccttgcagcagttcctgtttg
ttgactccggatgctttcttattaaaagctatagggccccacattcatgcccttgggtta
tctgagaaggctaaggacaatcctgttcatctacagttaattgcaatacgccgcattggc
attactcctgctttcttgattccattgagtgatgcccttgatgccgacgtaattgctctg
agtgataggccttggttactgcatactgccaggcacagcctttcatatacttccatctcc
tttcaaccttcatcacacgtcactcctgtttgttctgttgaatgcccaaaaggaatttta
tttgttgcagagaactgtctacatttggtggaaatggtgcacaccaaaaggcttaatgtg
cagaagtttcatcttggaggcactcctcggaaggttttatatcatagtgaaagtaggttg
ttacttgtaatgaggactgaattgagccatgattcatattcatctgacatatgttgtgta
gatccgctcagcgggtcagttttatcatcatttagacttgatcctggggaaacaggaaag
actatggatttagtgagggttggaaatgaacaggttttggtggttggaactagtcaatct
tcagatccagttataatgcccagtggtgaagctgaaagaagaaggaaagaaaacccttct
ctctctctctctcaagaagaaggaaagaaaaccctagatcgtcgacgaagaaatcaaaga
agaagaaggagacgacgaagaaaacccttgtctagtactaagggccggttgattgtcctc
tgccttgaaaatatgcacaattcagatagtggttctatgacattttactccaaggctggt
tcatcttctcaacaaacttcaccttttcatgaaattgttggatatgctgctgagcagctt
tcaagtagtagtctttgcagcagcccagatgataatagctgtgatggtatcaagcttgaa
gaaactgaatcatggcatttaaggttagcttgttcaaccatatggtctggaatgatactt
gcagtctgcccttaccttgatcgttatttcttggcttccgctggtaatgctttttatgtc
tgtggttttccgaatgataatccccaaagggtgagaagatttgctgtaggaaggacacgt
tttatgataatgacgctgactactcactttacgagaattgctgttggtgattgtcgtgat
ggaatccttttctatacctatcatgaggatgccaggagacttgatcaaatttactgtgat
ccttttcagaggttggtagctgattgtattcttatggatatcgacaccgctgttgtttca
gatcggaagggaagtatcaccgtcttgtcatgttcaaatcagttagaagatggtgcaagt
ccagaatgcaacttgacacggagttgttcattctatatgggtgagatagccatgagcatc
aggaagggttcattttcatgcaaacttccggctgatgatataatgaagggatgtgatgtt
gctaatacaattattggtaatagtatcatggccagtacgctattaggaagcatagttgtc
ttcattcctatatcacgggaagaatatgagcttttagaagttttgcaatctagactggtg
gttcatccactgaccgctcccattctaggaaatgatcataatgaatttcgcagccggcaa
tgttcagctggagtaccaaagatactcgacggggatatgctagctcagttcctggagctt
acaagcatgcagcaagaggccgtggtagcgttacctcttgggtcacctgatacagttatg
tttagttcgaaatcctcttctccggcgccaattactgtcaaccaggttgtgcgactcctt
gaacgagttcattatgccctaaattga
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integrated database retrieval system
